RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 BCAR1P56945 870 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 POU5F1Q01860 360 aaKnown RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 GPM6BQ13491 265 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 NAB2Q15742 525 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 NELFCDQ8IXH7 590 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 COLGALT2Q8IYK4 626 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 KLHL23Q8NBE8 558 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 CDX2Q99626 313 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 GTPBP4Q9BZE4 634 aaKnown RBP16.96■□□□□ 0.31
CPNE1-228ENST00000498814 CNTN3Q9P232 1028 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 DNAJB4Q9UDY4 337 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 PLAGL2Q9UPG8 496 aa16.96■□□□□ 0.31
CPNE1-228ENST00000498814 SMIM28A0A1B0GU29 152 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 TTC26A0AVF1 554 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 RFXAPO00287 272 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 LPXNO60711 386 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 ALDH2P05091 517 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 GALTP07902 379 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 CXCL8P10145 99 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 ACOT2P49753 483 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 ENOX2Q16206 610 aaKnown RBP16.95■□□□□ 0.3
CPNE1-228ENST00000498814 ZNF658Q5TYW1 1059 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-228ENST00000498814 ARMCX5Q6P1M9 558 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 CRELD2Q6UXH1 353 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-228ENST00000498814 HS2ST1Q7LGA3 356 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 CD302Q8IX05 232 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
CPNE1-228ENST00000498814 GOLGA5Q8TBA6 731 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 PPP1R10Q96QC0 940 aaKnown RBP16.95■□□□□ 0.3
CPNE1-228ENST00000498814 TSPAN18Q96SJ8 248 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 CBWD1Q9BRT8 395 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 RPF1Q9H9Y2 349 aaKnown RBP16.95■□□□□ 0.3
CPNE1-228ENST00000498814 AGPAT3Q9NRZ7 376 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 SPG21Q9NZD8 308 aa16.95■□□□□ 0.3
CPNE1-228ENST00000498814 PDXKO00764 312 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 EXTL3O43909 919 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 FGF18O76093 207 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 ITGB1P05556 798 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-228ENST00000498814 PBX3P40426 434 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 SLC11A1P49279 550 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 PLCB3Q01970 1234 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 TUSC3Q13454 348 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 COBLL1Q53SF7 1204 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 SLC39A11Q8N1S5 342 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 TMEM174Q8WUU8 243 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 MYLIPQ8WY64 445 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 ZMAT2Q96NC0 199 aaKnown RBP16.94■□□□□ 0.3
CPNE1-228ENST00000498814 GAS2L1Q99501 681 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-228ENST00000498814 LMAN2LQ9H0V9 348 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 KCTD10Q9H3F6 313 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 CLSTN2Q9H4D0 955 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 PCIF1Q9H4Z3 704 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 FAN1Q9Y2M0 1017 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 ATG2AQ2TAZ0 1938 aa16.94■□□□□ 0.3
CPNE1-228ENST00000498814 LACTBL1A8MY62 500 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 NRP1O14786 923 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 GRM6O15303 877 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 UBE3AQ05086 875 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 PPP2R3AQ06190 1150 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 ADGRE1Q14246 886 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 CAMK4Q16566 473 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 GLRA4Q5JXX5 417 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 GPD1LQ8N335 351 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 SPPL3Q8TCT6 385 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 SAAL1Q96ER3 474 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 FAM213AQ9BRX8 229 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 ASB7Q9H672 318 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 KIAA1586Q9HCI6 787 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 ALG13Q9NP73 1137 aaKnown RBP16.93■□□□□ 0.3
CPNE1-228ENST00000498814 SLC38A7Q9NVC3 462 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 HSPBP1Q9NZL4 362 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 LMCD1Q9NZU5 365 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 LZTS1Q9Y250 596 aa16.93■□□□□ 0.3
CPNE1-228ENST00000498814 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-228ENST00000498814 PRRC2BQ5JSZ5 2229 aaKnown RBP16.92■□□□□ 0.3
CPNE1-228ENST00000498814 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 CLIC2O15247 247 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 OR1G1P47890 313 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 KRT17Q04695 432 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 HSP90AA2PQ14568 343 aaPredicted RBP16.92■□□□□ 0.3
CPNE1-228ENST00000498814 ZBTB6Q15916 424 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 ZSWIM2Q8NEG5 633 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 GPT2Q8TD30 523 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 FBXL18Q96ME1 805 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 UROC1Q96N76 676 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 COLEC11Q9BWP8 271 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 TRAF3IP3Q9Y228 551 aa16.92■□□□□ 0.3
CPNE1-228ENST00000498814 MYO7AQ13402 2215 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
CPNE1-228ENST00000498814 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms