RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 IFRD2Q12894 506 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 VWA3BQ502W6 1294 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 RCSD1Q6JBY9 416 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MZT2AQ6P582 158 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 LRRC31Q6UY01 552 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 USP51Q70EK9 711 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 GRAMD2AQ8IUY3 354 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC103Q8IW40 242 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 C7orf61Q8IZ16 206 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 PJA1Q8NG27 643 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CCHCR1Q8TD31 782 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TRPC4APQ8TEL6 797 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 FNIP1Q8TF40 1166 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 NUP133Q8WUM0 1156 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 BTN2A2Q8WVV5 523 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF606Q8WXB4 792 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 LZICQ8WZA0 190 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CUL5Q93034 780 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 HOOK2Q96ED9 719 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 RBM41Q96IZ5 413 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 COG3Q96JB2 828 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 PSKH2Q96QS6 385 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC12A9Q9BXP2 914 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC8Q9H0W5 538 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TRPV6Q9H1D0 765 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CD93Q9NPY3 652 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 DDX25Q9UHL0 483 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 LCMT1Q9UIC8 334 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ATPIF1Q9UII2 106 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TMEFF2Q9UIK5 374 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 SNX11Q9Y5W9 270 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ARID1BQ8NFD5 2236 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MYOCOSA0A1B0GUC4 107 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 BLACEA4D250 179 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 F5H423 210 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TEX28O15482 410 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 KLF4O43474 513 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CYTH3O43739 400 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 GFPT2O94808 682 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 VAV1P15498 845 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 DDIT3P35638 169 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MC3RP41968 323 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC8A3P57103 927 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CORO7P57737 925 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 PHEXP78562 749 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CDK17Q00537 523 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 KIF5AQ12840 1032 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CWF19L1Q69YN2 538 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 HEATR6Q6AI08 1181 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 NEK5Q6P3R8 708 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ANGPTL8Q6UXH0 198 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 C22orf34Q6ZV56 151 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ATG4DQ86TL0 474 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 RTKN2Q8IZC4 609 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 CCAR2Q8N163 923 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TAB3Q8N5C8 712 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MAGEB6Q8N7X4 407 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ABHD4Q8TB40 342 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 LINC01599Q8WXQ3 324 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 DPF3Q92784 378 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 PDLIM2Q96JY6 352 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ALS2CR12Q96Q35 445 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MTMR9Q96QG7 549 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 JMJD8Q96S16 334 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ELAC2Q9BQ52 826 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 TRIT1Q9H3H1 467 aaKnown RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 ZSCAN16Q9H4T2 348 aaPredicted RBP3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 DMTF1Q9Y222 760 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 DGKBQ9Y6T7 804 aa3.38□□□□□ -1.87
SNRNP48-202ENST00000496946 MAPK8IP3Q9UPT6 1336 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SMARCA4P51532 1647 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 F8W031 263 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PLOD2O00469 737 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 APAF1O14727 1248 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ZBTB43O43298 467 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 KCNQ2O43526 872 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PPP1R11O60927 126 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 EPN2O95208 641 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SERPINC1P01008 464 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TRIM27P14373 513 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PRKCAP17252 672 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 MUTP22033 750 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CD86P42081 329 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 NR2C2P49116 596 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 FNTAP49354 379 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SEPHS1P49903 392 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SCNN1BP51168 640 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PMS2P54278 862 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TPM4P67936 248 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PURAQ00577 322 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ROR2Q01974 943 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 RUNX1T1Q06455 604 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TCEA2Q15560 299 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 VMACQ2NL98 169 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 C15orf59Q2T9L4 293 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 FAM102BQ5T8I3 360 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 NUGGCQ68CJ6 796 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms