RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ZBED9Q6R2W3 1325 aa7.91□□□□□ -1.14
VIM-207ENST00000495528 MROH5Q6ZUA9 1318 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 SLC12A8A0AV02 714 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 FAM90A27PA6NNH2 459 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 FRAT2O75474 233 aaPredicted RBP7.9□□□□□ -1.14
VIM-207ENST00000495528 CYP2C8P10632 490 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 CETPP11597 493 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 PTPN1P18031 435 aaKnown RBP7.9□□□□□ -1.14
VIM-207ENST00000495528 CTGFP29279 349 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 NKX3-2P78367 333 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 SLFN5Q08AF3 891 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 KCNA10Q16322 511 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 APOBEC3HQ6NTF7 200 aaKnown RBP7.9□□□□□ -1.14
VIM-207ENST00000495528 TEPPQ6URK8 271 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 B3GNT8Q7Z7M8 397 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 ERO1BQ86YB8 467 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 TEKT1Q969V4 418 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 WRNIP1Q96S55 665 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 MRIQ9BWK5 157 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 BICC1Q9H694 974 aaKnown RBP7.9□□□□□ -1.14
VIM-207ENST00000495528 CD320Q9NPF0 282 aa7.9□□□□□ -1.14
VIM-207ENST00000495528 ZNF521Q96K83 1311 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 H0YGN5 161 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 ACOT7O00154 380 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 WDHD1O75717 1129 aaPredicted RBP7.89□□□□□ -1.15
VIM-207ENST00000495528 PDE8BO95263 885 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 EPHA5P54756 1037 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 LINC00310P59036 64 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 SNAPC2Q13487 334 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 KIF22Q14807 665 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 SKOR2Q2VWA4 1001 aaPredicted RBP7.89□□□□□ -1.15
VIM-207ENST00000495528 RABL6Q3YEC7 729 aaPredicted RBP7.89□□□□□ -1.15
VIM-207ENST00000495528 CAVIN4Q5BKX8 364 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 FIGNQ5HY92 759 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 METTL24Q5JXM2 366 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 CNKSR3Q6P9H4 555 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 C17orf99Q6UX52 265 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 TMC5Q6UXY8 1006 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 MIGA2Q7L4E1 593 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 FAM83AQ86UY5 434 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 NXPE1Q8N323 547 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 ANKRD44Q8N8A2 993 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 CHST14Q8NCH0 376 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 KLHDC4Q8TBB5 520 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 NOX5Q96PH1 765 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
VIM-207ENST00000495528 ZCCHC17Q9NP64 241 aaKnown RBP7.89□□□□□ -1.15
VIM-207ENST00000495528 CPA4Q9UI42 421 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.89□□□□□ -1.15
VIM-207ENST00000495528 CENPFP49454 3210 aa7.89□□□□□ -1.15
VIM-207ENST00000495528 UTYO14607 1347 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 BRCA2P51587 3418 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 A0A087X0B3 334 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.88□□□□□ -1.15
VIM-207ENST00000495528 PTPDC1A2A3K4 754 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 PRAMEF25A6NGN4 478 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 CBX4O00257 560 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 FAHP16930 419 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 IRF9Q00978 393 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 PPATQ06203 517 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 PPIL2Q13356 520 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 SMAD4Q13485 552 aaKnown RBP7.88□□□□□ -1.15
VIM-207ENST00000495528 FKBP1CQ5VVH2 108 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 PKN3Q6P5Z2 889 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 HHIPL2Q6UWX4 724 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 ZNF662Q6ZS27 426 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 FAM129CQ86XR2 697 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 UBR7Q8N806 425 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 VGLL2Q8N8G2 317 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 BHLHE22Q8NFJ8 381 aaPredicted RBP7.88□□□□□ -1.15
VIM-207ENST00000495528 LEO1Q8WVC0 666 aaPredicted RBP7.88□□□□□ -1.15
VIM-207ENST00000495528 PWWP2AQ96N64 755 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 GORASP1Q9BQQ3 440 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 TMOD2Q9NZR1 351 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 PMF1-BGLAPU3KQ54 211 aa7.88□□□□□ -1.15
VIM-207ENST00000495528 ECM29Q5VYK3 1845 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 LAMB1P07942 1786 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 PDHXO00330 501 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
VIM-207ENST00000495528 CENPBP07199 599 aaPredicted RBP7.87□□□□□ -1.15
VIM-207ENST00000495528 FGFR2P21802 821 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 PSMC4P43686 418 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 MASP1P48740 699 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 MECP2P51608 486 aaKnown RBP7.87□□□□□ -1.15
VIM-207ENST00000495528 PRMT2P55345 433 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 MOGSQ13724 837 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 SEC23AQ15436 765 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 ANKRD23Q86SG2 305 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 NOSTRINQ8IVI9 506 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 TRMT2AQ8IZ69 625 aaKnown RBP7.87□□□□□ -1.15
VIM-207ENST00000495528 PPM1KQ8N3J5 372 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.87□□□□□ -1.15
VIM-207ENST00000495528 FAM151AQ8WW52 585 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 ZBTB8AQ96BR9 441 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 HOOK2Q96ED9 719 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 ZSWIM3Q96MP5 696 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 ZNF341Q9BYN7 854 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 IRF2BPLQ9H1B7 796 aa7.87□□□□□ -1.15
VIM-207ENST00000495528 SRRDQ9UH36 339 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms