RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ELOA2Q8IYF1 753 aaPredicted RBP21.19■□□□□ 0.98
HDAC4-212ENST00000495497 COLGALT2Q8IYK4 626 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 TMEM130Q8N3G9 435 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 NOC3LQ8WTT2 800 aaKnown RBP21.19■□□□□ 0.98
HDAC4-212ENST00000495497 RABGGTAQ92696 567 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 ZMAT2Q96NC0 199 aaKnown RBP21.19■□□□□ 0.98
HDAC4-212ENST00000495497 TOPORSQ9NS56 1045 aaPredicted RBP21.19■□□□□ 0.98
HDAC4-212ENST00000495497 HOOK1Q9UJC3 728 aaKnown RBP21.19■□□□□ 0.98
HDAC4-212ENST00000495497 CPSF3Q9UKF6 684 aaKnown RBP21.19■□□□□ 0.98
HDAC4-212ENST00000495497 KIAA1671Q9BY89 1806 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 UBE4BO95155 1302 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 SMIM28A0A1B0GU29 152 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 FGF18O76093 207 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 THP07101 528 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 GARTP22102 1010 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 OR1G1P47890 313 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 ALDH7A1P49419 539 aaKnown RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 DSC1Q08554 894 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 NAB2Q15742 525 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 ENOX2Q16206 610 aaKnown RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 KNOP1Q1ED39 458 aaKnown RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 XKR4Q5GH76 650 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 ARMCX5Q6P1M9 558 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 CRELD2Q6UXH1 353 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 SLC39A11Q8N1S5 342 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 SPATA20Q8TB22 786 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 SPPL3Q8TCT6 385 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 BCL7CQ8WUZ0 217 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 P2RX5Q93086 422 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 FAM212AQ96EL1 285 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 GAS2L1Q99501 681 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 FAM213AQ9BRX8 229 aa21.18■□□□□ 0.98
HDAC4-212ENST00000495497 C11orf84Q9BUA3 381 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 RPF1Q9H9Y2 349 aaKnown RBP21.18■□□□□ 0.98
HDAC4-212ENST00000495497 CASTOR2A6NHX0 329 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 LACTBL1A8MY62 500 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 F8W810 466 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 NRP1O14786 923 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 DNAJB1P25685 340 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 GSDMAQ96QA5 445 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 PPP1R10Q96QC0 940 aaKnown RBP21.17■□□□□ 0.98
HDAC4-212ENST00000495497 PAAF1Q9BRP4 392 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 GOLGA2P5Q9HBQ8 144 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 AGPAT3Q9NRZ7 376 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 SPG21Q9NZD8 308 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 CNTN3Q9P232 1028 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 FAN1Q9Y2M0 1017 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 PRG3Q9Y2Y8 225 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-212ENST00000495497 NLRC5Q86WI3 1866 aa21.17■□□□□ 0.98
HDAC4-212ENST00000495497 TTC26A0AVF1 554 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 GOLGA6L22H0YM25 854 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 TULP1O00294 542 aaPredicted RBP21.16■□□□□ 0.98
HDAC4-212ENST00000495497 ALDH2P05091 517 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 FOSL2P15408 326 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 SOX4Q06945 474 aaPredicted RBP21.16■□□□□ 0.98
HDAC4-212ENST00000495497 KYAT1Q16773 422 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 GPT2Q8TD30 523 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 POF1BQ8WVV4 589 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 C18orf25Q96B23 403 aaPredicted RBP21.16■□□□□ 0.98
HDAC4-212ENST00000495497 TMEM175Q9BSA9 504 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 RMND1Q9NWS8 449 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 HSPBP1Q9NZL4 362 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 MAN1B1Q9UKM7 699 aa21.16■□□□□ 0.98
HDAC4-212ENST00000495497 BIN1O00499 593 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 KCNE1P15382 129 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 CYP2J2P51589 502 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 PPP2R3AQ06190 1150 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 TUSC3Q13454 348 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 CAMK1Q14012 370 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 IGSF21Q96ID5 467 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 KCTD10Q9H3F6 313 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 MTCH2Q9Y6C9 303 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 RALGAPA2Q2PPJ7 1873 aa21.15■□□□□ 0.98
HDAC4-212ENST00000495497 IGFBP6P24592 240 aaPredicted RBP21.14■□□□□ 0.97
HDAC4-212ENST00000495497 WNT7BP56706 349 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 ZNF658Q5TYW1 1059 aaPredicted RBP21.14■□□□□ 0.97
HDAC4-212ENST00000495497 HS2ST1Q7LGA3 356 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 GPD1LQ8N335 351 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 MICALL1Q8N3F8 863 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 KIF12Q96FN5 646 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 CLSTN2Q9H4D0 955 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 PLEKHA5Q9HAU0 1116 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 MARCH5Q9NX47 278 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 PCDHGC5Q9Y5F6 944 aa21.14■□□□□ 0.97
HDAC4-212ENST00000495497 COL4A4P53420 1690 aaPredicted RBP21.14■□□□□ 0.97
HDAC4-212ENST00000495497 EXTL3O43909 919 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 LDHAP00338 332 aaKnown RBP21.13■□□□□ 0.97
HDAC4-212ENST00000495497 ADRB2P07550 413 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 IRS1P35568 1242 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 PPM1AP35813 382 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 PRCPP42785 496 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 PLCB3Q01970 1234 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 CBWD2Q8IUF1 395 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 GUF1Q8N442 669 aaKnown RBP21.13■□□□□ 0.97
HDAC4-212ENST00000495497 RDH13Q8NBN7 331 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 TMEM169Q96HH4 297 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 VN1R3Q9BXE9 311 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 TUBGCP4Q9UGJ1 667 aa21.13■□□□□ 0.97
HDAC4-212ENST00000495497 PDXKO00764 312 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms