RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
RPSA-209ENST00000495394 UCK1Q9HA47 277 aa9.97□□□□□ -0.81
RPSA-209ENST00000495394 SLC52A2Q9HAB3 445 aa9.97□□□□□ -0.81
RPSA-209ENST00000495394 RRN3Q9NYV6 651 aa9.97□□□□□ -0.81
RPSA-209ENST00000495394 VPS18Q9P253 973 aa9.97□□□□□ -0.81
RPSA-209ENST00000495394 DDX20Q9UHI6 824 aaKnown RBP9.97□□□□□ -0.81
RPSA-209ENST00000495394 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
RPSA-209ENST00000495394 ITIH6Q6UXX5 1313 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 A0A1W2PQ67 120 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ZSCAN5CA6NGD5 496 aaPredicted RBP9.96□□□□□ -0.81
RPSA-209ENST00000495394 CAPN9O14815 690 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ZBTB7BO15156 539 aaPredicted RBP9.96□□□□□ -0.81
RPSA-209ENST00000495394 SMIM24O75264 130 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 NIPSNAP2O75323 286 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 SEC24BO95487 1268 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 GSTT2P0CG29 244 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 GSTT2BP0CG30 244 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 CSF2RAP15509 400 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ALDH3A1P30838 453 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 SLC8A1P32418 973 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ECE1P42892 770 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 AARSP49588 968 aaKnown RBP eCLIP9.96□□□□□ -0.81
RPSA-209ENST00000495394 TFAP4Q01664 338 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 TRPC3Q13507 836 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 KRTCAP3Q53RY4 240 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 PPP2R2DQ66LE6 453 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 RHOUQ7L0Q8 258 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 FAM124AQ86V42 546 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 HACE1Q8IYU2 909 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ZNF579Q8NAF0 562 aaKnown RBP9.96□□□□□ -0.81
RPSA-209ENST00000495394 C8orf58Q8NAV2 365 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 BCAS4Q8TDM0 211 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.81
RPSA-209ENST00000495394 DENND1AQ8TEH3 1009 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 PGBD1Q96JS3 809 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 LLPHQ9BRT6 129 aaKnown RBP9.96□□□□□ -0.81
RPSA-209ENST00000495394 NUF2Q9BZD4 464 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 SSUH2Q9Y2M2 353 aa9.96□□□□□ -0.81
RPSA-209ENST00000495394 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 CTAGE9A4FU28 777 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 A6NHS1 94 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ALG1L2C9J202 215 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 PSMD9O00233 223 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 RNF40O75150 1001 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 TACC1O75410 805 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 APBA3O96018 575 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ACTN1P12814 892 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ZAP70P43403 619 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 IFNAR2P48551 515 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 VCPP55072 806 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 NLRP5P59047 1200 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 CYP4F8P98187 520 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 BORAQ6PGQ7 559 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 SHQ1Q6PI26 577 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 BEND4Q6ZU67 534 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 BZW1Q7L1Q6 419 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 STRA8Q7Z7C7 330 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 BSNDQ8WZ55 320 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 PIGBQ92521 554 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ZC3H10Q96K80 434 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 NUSAP1Q9BXS6 441 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 VPS16Q9H269 839 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 PCMTD2Q9NV79 361 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 FNIP2Q9P278 1114 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ADAM21Q9UKJ8 722 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 KCNH4Q9UQ05 1017 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 CICQ96RK0 1608 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 SLC9B1P1A6NJY1 282 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 GREM1O60565 184 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 LCA5LO95447 670 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 HSPA4LO95757 839 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ACAT1P24752 427 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 CCT5P48643 541 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 LIG3P49916 1009 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 PRKCEQ02156 737 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 KRT32Q14532 448 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 RFTN1Q14699 578 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 CWF19L2Q2TBE0 894 aaKnown RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 ARL13BQ3SXY8 428 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 FBXO48Q5FWF7 155 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 FYB2Q5VWT5 728 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 ITPRIPL1Q6GPH6 555 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 CYB5D1Q6P9G0 228 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 C3orf62Q6ZUJ4 267 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 HOMER1Q86YM7 354 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 C11orf24Q96F05 449 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 ERO1AQ96HE7 468 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 DEPDC7Q96QD5 511 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 C12orf4Q9NQ89 552 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 TOPORSQ9NS56 1045 aaPredicted RBP9.95□□□□□ -0.82
RPSA-209ENST00000495394 GGA3Q9NZ52 723 aa9.95□□□□□ -0.82
RPSA-209ENST00000495394 IL37Q9NZH6 218 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms