RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 TLR9Q9NR96 1032 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 PRG3Q9Y2Y8 225 aaPredicted RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 STYXL1Q9Y6J8 313 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 XIRP2A4UGR9 3374 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 MYO7AQ13402 2215 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 UNC80Q8N2C7 3258 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 SMIM28A0A1B0GU29 152 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 PRPF6O94906 941 aaKnown RBP18.71■□□□□ 0.59
SNX17-209ENST00000494893 ALDH2P05091 517 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 ADSSP30520 456 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 OR1G1P47890 313 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 EPM2AIP1Q7L775 607 aaPredicted RBP18.71■□□□□ 0.59
SNX17-209ENST00000494893 CEP57L1Q8IYX8 460 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 TMEM169Q96HH4 297 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 FAN1Q9Y2M0 1017 aa18.71■□□□□ 0.59
SNX17-209ENST00000494893 HIDE1A8MVS5 230 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 MBD3O95983 291 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 THP07101 528 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 PRR29P0C7W0 189 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 ABCD1P33897 745 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 SOX4Q06945 474 aaPredicted RBP18.7■□□□□ 0.58
SNX17-209ENST00000494893 TUSC3Q13454 348 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 DDX53Q86TM3 631 aaKnown RBP18.7■□□□□ 0.58
SNX17-209ENST00000494893 RNF168Q8IYW5 571 aaPredicted RBP18.7■□□□□ 0.58
SNX17-209ENST00000494893 TMEM130Q8N3G9 435 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 ZSWIM2Q8NEG5 633 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 ACAP3Q96P50 834 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 ACCSQ96QU6 501 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 ZBP1Q9H171 429 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 CNTN3Q9P232 1028 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 USP25Q9UHP3 1055 aa18.7■□□□□ 0.58
SNX17-209ENST00000494893 TDRD15B5MCY1 1934 aaKnown RBP18.69■□□□□ 0.58
SNX17-209ENST00000494893 PVALEFA0A1B0GWK0 134 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 CASTOR2A6NHX0 329 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 OGTO15294 1046 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 CXCL8P10145 99 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 KCNE1P15382 129 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 KRT17Q04695 432 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 ENOX2Q16206 610 aaKnown RBP18.69■□□□□ 0.58
SNX17-209ENST00000494893 FAM26FQ5R3K3 315 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 PLPP4Q5VZY2 271 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 KRBA2Q6ZNG9 492 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 TAS1R1Q7RTX1 841 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 FMR1NBQ8N0W7 255 aaPredicted RBP18.69■□□□□ 0.58
SNX17-209ENST00000494893 ENGASEQ8NFI3 743 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 GPT2Q8TD30 523 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 AUTS2Q8WXX7 1259 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 TCF25Q9BQ70 676 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 MSTO1Q9BUK6 570 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 GOLGA2P5Q9HBQ8 144 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 PCDHB13Q9Y5F0 798 aa18.69■□□□□ 0.58
SNX17-209ENST00000494893 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 TTC26A0AVF1 554 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 CARNS1A5YM72 827 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 LINC01565O15544 149 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 ZNF202O95125 648 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 ADRB2P07550 413 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 CLTAP09496 248 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 MATR3P43243 847 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX17-209ENST00000494893 YARSP54577 528 aaKnown RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 TFF2Q03403 129 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 SNW1Q13573 536 aaKnown RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 ALCAMQ13740 583 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 SKIV2LQ15477 1246 aaKnown RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 CTC1Q2NKJ3 1217 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 KLHL40Q2TBA0 621 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 CD300LGQ6UXG3 332 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 CRELD2Q6UXH1 353 aaPredicted RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX17-209ENST00000494893 VPS52Q8N1B4 723 aa18.68■□□□□ 0.58
SNX17-209ENST00000494893 C18orf25Q96B23 403 aaPredicted RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 TOPORSQ9NS56 1045 aaPredicted RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 CPSF3Q9UKF6 684 aaKnown RBP18.68■□□□□ 0.58
SNX17-209ENST00000494893 KIF4AO95239 1232 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 LTBRP36941 435 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 NRIP1P48552 1158 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 RBM10P98175 930 aaKnown RBP18.67■□□□□ 0.58
SNX17-209ENST00000494893 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
SNX17-209ENST00000494893 TMC7Q7Z402 723 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 RBM23Q86U06 439 aaKnown RBP18.67■□□□□ 0.58
SNX17-209ENST00000494893 VN1R2Q8NFZ6 395 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 ZNF507Q8TCN5 953 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 MICAL1Q8TDZ2 1067 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 SCFD1Q8WVM8 642 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 GPR62Q9BZJ7 368 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 UBE2ZQ9H832 354 aaPredicted RBP18.67■□□□□ 0.58
SNX17-209ENST00000494893 ENTPD7Q9NQZ7 604 aa18.67■□□□□ 0.58
SNX17-209ENST00000494893 C2orf71A6NGG8 1288 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 LACTBL1A8MY62 500 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 PER2O15055 1255 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.585e-6■□□□□ 8.9
SNX17-209ENST00000494893 LILRB3O75022 631 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 CTSAP10619 480 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 ACOT2P49753 483 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 WNT7BP56706 349 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 SPAG1Q07617 926 aa18.66■□□□□ 0.58
SNX17-209ENST00000494893 DLX2Q07687 328 aaPredicted RBP18.66■□□□□ 0.58
SNX17-209ENST00000494893 DPYDQ12882 1025 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms