RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 B4GALT5O43286 388 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 USP8P40818 1118 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 MEI1Q5TIA1 1274 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 C17orf99Q6UX52 265 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 SLC47A2Q86VL8 602 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 OR6J1Q8NGC5 347 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 OR5B17Q8NGF7 314 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 DHX38Q92620 1227 aaKnown RBP17.82■□□□□ 0.44
ATG4B-225ENST00000494465 USP6NLQ92738 828 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 HYOU1Q9Y4L1 999 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 MAGEB2O15479 319 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 FTCDO95954 541 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 HOXC6P09630 235 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 POU5F1BQ06416 359 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 PRAMEF19Q5SWL8 479 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
ATG4B-225ENST00000494465 SLC5A4Q9NY91 659 aa17.82■□□□□ 0.44
ATG4B-225ENST00000494465 INO80B-WBP1J3KQ70 363 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 OGTO15294 1046 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 SLC10A3P09131 477 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TMEM253P0C7T8 217 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TCP1P17987 556 aaKnown RBP17.81■□□□□ 0.44
ATG4B-225ENST00000494465 MARCH8Q5T0T0 291 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 SCARA3Q6AZY7 606 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 IFNL1Q8IU54 200 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TPCN2Q8NHX9 752 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 PCDHB18PQ96TA0 734 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 ARID3AQ99856 593 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TCHPQ9BT92 498 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 PARD6BQ9BYG5 372 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 INO80BQ9C086 356 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-225ENST00000494465 CPSF3Q9UKF6 684 aaKnown RBP17.81■□□□□ 0.44
ATG4B-225ENST00000494465 NCANO14594 1321 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 CXCR5P32302 372 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 PIK3CAP42336 1068 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 CLCN6P51797 869 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TUBB4BP68371 445 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 CKAP4Q07065 602 aaKnown RBP17.81■□□□□ 0.44
ATG4B-225ENST00000494465 EEF1DP3Q658K8 133 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 MTHFD1LQ6UB35 978 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 MPZL3Q6UWV2 235 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 ENOSF1Q7L5Y1 443 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 ZNF572Q7Z3I7 529 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-225ENST00000494465 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-225ENST00000494465 PSMB7Q99436 277 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TSKSQ9UJT2 592 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 PASKQ96RG2 1323 aa17.81■□□□□ 0.44
ATG4B-225ENST00000494465 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 GRM1Q13255 1194 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 BIRC3Q13489 604 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 AMHR2Q16671 573 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 ATF7IP2Q5U623 682 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 SPOPLQ6IQ16 392 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 MSANTD4Q8NCY6 345 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 DDX1Q92499 740 aaKnown RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 ISCUQ9H1K1 167 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 GOLPH3Q9H4A6 298 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 APOBEC3GQ9HC16 384 aaKnown RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 C1orf112Q9NSG2 853 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 SEPT11Q9NVA2 429 aaKnown RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 ZNF446Q9NWS9 450 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 FAM155AB1AL88 458 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 CYP11B1P15538 503 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 NOP2P46087 812 aaKnown RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 FMO1Q01740 532 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 IRF5Q13568 498 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 DGKDQ16760 1214 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 SLFN11Q7Z7L1 901 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 ARHGEF26Q96DR7 871 aa17.8■□□□□ 0.44
ATG4B-225ENST00000494465 PACSIN2Q9UNF0 486 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-225ENST00000494465 A0A087WZ62 844 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 ANKRD62A6NC57 917 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 MMEP08473 750 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 ZNF865P0CJ78 1059 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-225ENST00000494465 CCL14Q16627 93 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
ATG4B-225ENST00000494465 RFFLQ8WZ73 363 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 RPGRIP1Q96KN7 1286 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 FDXACB1Q9BRP7 624 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-225ENST00000494465 THAP2Q9H0W7 228 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 OSGEPQ9NPF4 335 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 TNFSF13BQ9Y275 285 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 FAM170AA1A519 330 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 A6NJR5 290 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 IGHA2P01877 340 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 VTNP04004 478 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 ABCB4P21439 1286 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 PHKA2P46019 1235 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 PPFIA1Q13136 1202 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 GRIK4Q16099 956 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 ZNF568Q3ZCX4 644 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 WDR44Q5JSH3 913 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 TAF3Q5VWG9 929 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 CDR2LQ86X02 465 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-225ENST00000494465 WDR49Q8IV35 697 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 SLC35G2Q8TBE7 412 aa17.79■□□□□ 0.44
ATG4B-225ENST00000494465 FAM81BQ96LP2 452 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms