RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 RPLP2P05387 115 aaKnown RBP22.32■■□□□ 1.16
KPNA1-210ENST00000494339 CXCL8P10145 99 aa22.32■■□□□ 1.16
KPNA1-210ENST00000494339 RRAGAQ7L523 313 aa22.32■■□□□ 1.16
KPNA1-210ENST00000494339 DNAJC7Q99615 494 aa22.32■■□□□ 1.16
KPNA1-210ENST00000494339 RPF1Q9H9Y2 349 aaKnown RBP22.32■■□□□ 1.16
KPNA1-210ENST00000494339 UCHL3P15374 230 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 MGAT3Q09327 533 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 EPC2Q52LR7 807 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 SLC27A1Q6PCB7 646 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 GJB7Q6PEY0 223 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 EHBP1Q8NDI1 1231 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 LMO3Q8TAP4 145 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 BAP1Q92560 729 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 ZNF333Q96JL9 665 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 CGRRF1Q99675 332 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 EIF2AQ9BY44 585 aaKnown RBP22.31■■□□□ 1.16
KPNA1-210ENST00000494339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.31■■□□□ 1.169e-7■■■■■ 208.4
KPNA1-210ENST00000494339 FHOD1Q9Y613 1164 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 PMM2O15305 246 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 CLTAP09496 248 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 TSR1Q2NL82 804 aaKnown RBP22.31■■□□□ 1.16
KPNA1-210ENST00000494339 TAS1R2Q8TE23 839 aa22.31■■□□□ 1.16
KPNA1-210ENST00000494339 LRRC53A6NM62 1247 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 RPS6KA5O75582 802 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 AXLP30530 894 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 CTCFP49711 727 aaPredicted RBP22.3■■□□□ 1.16
KPNA1-210ENST00000494339 TRIM71Q2Q1W2 868 aaKnown RBP22.3■■□□□ 1.16
KPNA1-210ENST00000494339 DCAF4L1Q3SXM0 396 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 GPIHBP1Q8IV16 184 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 OR5B17Q8NGF7 314 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 SEMA4DQ92854 862 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 EDEM3Q9BZQ6 932 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 AJAP1Q9UKB5 411 aaPredicted RBP22.3■■□□□ 1.16
KPNA1-210ENST00000494339 CITO14578 2027 aa22.3■■□□□ 1.16
KPNA1-210ENST00000494339 CCP110O43303 1012 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 NFX1Q12986 1120 aaKnown RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 BIRC3Q13489 604 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 C15orf39Q6ZRI6 1047 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 FBXL13Q8NEE6 735 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 OSBPL7Q9BZF2 842 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 OFD1O75665 1012 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 C4BPAP04003 597 aaKnown RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 FECHP22830 423 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 ZACNQ401N2 412 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 TDRD10Q5VZ19 366 aaKnown RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 PDXDC1Q6P996 788 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 APBB1IPQ7Z5R6 666 aaPredicted RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 WDR49Q8IV35 697 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 U2AF1L4Q8WU68 220 aaKnown RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 TRIM6Q9C030 488 aaPredicted RBP22.29■■□□□ 1.16
KPNA1-210ENST00000494339 ST3GAL5Q9UNP4 418 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 COQ4Q9Y3A0 265 aa22.29■■□□□ 1.16
KPNA1-210ENST00000494339 SOWAHDA6NJG2 315 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 MEFVO15553 781 aaPredicted RBP22.28■■□□□ 1.16
KPNA1-210ENST00000494339 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
KPNA1-210ENST00000494339 RAPGEF1Q13905 1077 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 SURF1Q15526 300 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 KYAT1Q16773 422 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 ZNF618Q5T7W0 954 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 E4F1Q66K89 784 aaPredicted RBP22.28■■□□□ 1.16
KPNA1-210ENST00000494339 IQCEQ6IPM2 695 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 PHLDB3Q6NSJ2 640 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 WDR59Q6PJI9 974 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 CCAR2Q8N163 923 aaKnown RBP22.28■■□□□ 1.16
KPNA1-210ENST00000494339 ELMO3Q96BJ8 720 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 ACAP3Q96P50 834 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 RAB20Q9NX57 234 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 APEX2Q9UBZ4 518 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 HES2Q9Y543 173 aa22.28■■□□□ 1.16
KPNA1-210ENST00000494339 GHRP10912 638 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 GRM5P41594 1212 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 TFAMQ00059 246 aaKnown RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 SPAG5Q96R06 1193 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 MTMR12Q9C0I1 747 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 AGO3Q9H9G7 860 aaKnown RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 ZNHIT6Q9NWK9 470 aaKnown RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 FBXL5Q9UKA1 691 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 TRIP11Q15643 1979 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 MROH7Q68CQ1 1323 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 LACTBL1A8MY62 500 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 IL18RAPO95256 599 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 SGPL1O95470 568 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 CKBP12277 381 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 CDK7P50613 346 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 PKN2Q16513 984 aaKnown RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 SLC10A6Q3KNW5 377 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 FBXO47Q5MNV8 452 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 TWF2Q6IBS0 349 aaKnown RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 EFCAB13Q8IY85 973 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 CHP1Q99653 195 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 PI4K2AQ9BTU6 479 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 CCDC94Q9BW85 323 aaPredicted RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 CRISPLD2Q9H0B8 497 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 NXF3Q9H4D5 531 aaKnown RBP22.27■■□□□ 1.16
KPNA1-210ENST00000494339 SNTG2Q9NY99 539 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 DNAJC12Q9UKB3 198 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 PLAGL2Q9UPG8 496 aa22.27■■□□□ 1.16
KPNA1-210ENST00000494339 PIK3CAP42336 1068 aa22.26■■□□□ 1.15
KPNA1-210ENST00000494339 UBXN11Q5T124 520 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms