RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GUCD1Q96NT3 240 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 SLC38A7Q9NVC3 462 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 DNAJB4Q9UDY4 337 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 TRIP11Q15643 1979 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 FGF18O76093 207 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 GALTP07902 379 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 FOSL2P15408 326 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 IGFBP4P22692 258 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 PBX3P40426 434 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 OR1G1P47890 313 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 SLC11A1P49279 550 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 DSC1Q08554 894 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 TUSC3Q13454 348 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 PTPROQ16827 1216 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 GLRA4Q5JXX5 417 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 ZBTB41Q5SVQ8 909 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 ALKAL1Q6UXT8 129 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 COLGALT2Q8IYK4 626 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 SPATA20Q8TB22 786 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 FAM213AQ9BRX8 229 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 CNTN3Q9P232 1028 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 PUF60Q9UHX1 559 aaKnown RBP13.58□□□□□ -0.24
TRA2A-209ENST00000494255 CPSF3Q9UKF6 684 aaKnown RBP13.58□□□□□ -0.24
TRA2A-209ENST00000494255 PLAGL2Q9UPG8 496 aa13.58□□□□□ -0.24
TRA2A-209ENST00000494255 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 NT5C1B-RDH14C9J2C7 533 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 TGFB1I1O43294 461 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 FAM189A1O60320 539 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 ITGB1P05556 798 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 KCNE1P15382 129 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 POU5F1Q01860 360 aaKnown RBP13.57□□□□□ -0.24
TRA2A-209ENST00000494255 UBE3AQ05086 875 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 ENOX2Q16206 610 aaKnown RBP13.57□□□□□ -0.24
TRA2A-209ENST00000494255 CAMK4Q16566 473 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 XKR4Q5GH76 650 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 ZNF658Q5TYW1 1059 aaPredicted RBP13.57□□□□□ -0.24
TRA2A-209ENST00000494255 CD302Q8IX05 232 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 SAAL1Q96ER3 474 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 TMEM169Q96HH4 297 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 PPP1R10Q96QC0 940 aaKnown RBP13.57□□□□□ -0.24
TRA2A-209ENST00000494255 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 LMAN2LQ9H0V9 348 aa13.57□□□□□ -0.24
TRA2A-209ENST00000494255 ALG13Q9NP73 1137 aaKnown RBP13.57□□□□□ -0.24
TRA2A-209ENST00000494255 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
TRA2A-209ENST00000494255 TTC26A0AVF1 554 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 NRP1O14786 923 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 XPOTO43592 962 aaKnown RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 CALUO43852 315 aaPredicted RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 EXTL3O43909 919 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 B4GALT3O60512 393 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 LPXNO60711 386 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 IL18RAPO95256 599 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 PLCB3Q01970 1234 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 GPD1LQ8N335 351 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 SPPL3Q8TCT6 385 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 IGSF21Q96ID5 467 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 UROC1Q96N76 676 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 CXCL16Q9H2A7 254 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 CLSTN2Q9H4D0 955 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 MAPK8IP1Q9UQF2 711 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 LZTS1Q9Y250 596 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 LAMA2P24043 3122 aaKnown RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 CASTOR2A6NHX0 329 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 PDXKO00764 312 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 CLIC2O15247 247 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 GRM6O15303 877 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 CYP2J2P51589 502 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 STIM1Q13586 685 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 POF1BQ8WVV4 589 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 KCTD10Q9H3F6 313 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 ASB7Q9H672 318 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 RBAKQ9NYW8 714 aaPredicted RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 PDCD11Q14690 1871 aaKnown RBP13.56□□□□□ -0.24
TRA2A-209ENST00000494255 PLXNA4Q9HCM2 1894 aa13.56□□□□□ -0.24
TRA2A-209ENST00000494255 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 ZNF233A6NK53 670 aa13.55□□□□□ -0.24
TRA2A-209ENST00000494255 MEFVO15553 781 aaPredicted RBP13.55□□□□□ -0.24
TRA2A-209ENST00000494255 MBD3O95983 291 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms