RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MEFVO15553 781 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-224ENST00000494132 TADA2AO75478 443 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 TOM1L1O75674 476 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 KIF4AO95239 1232 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 URODP06132 367 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 MCF2P10911 925 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 SSTR3P32745 418 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-224ENST00000494132 LIG4P49917 911 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 YARSP54577 528 aaKnown RBP16.09■□□□□ 0.17
ATG4B-224ENST00000494132 HSP90AA2PQ14568 343 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-224ENST00000494132 PUS10Q3MIT2 529 aaKnown RBP16.09■□□□□ 0.17
ATG4B-224ENST00000494132 ANKRD54Q6NXT1 300 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 SMRP1Q8NCR6 262 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 DHX58Q96C10 678 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 DNAJC19Q96DA6 116 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 SNX27Q96L92 541 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 ACAP3Q96P50 834 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 KLHL5Q96PQ7 755 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 ADAM28Q9UKQ2 775 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 TBX20Q9UMR3 447 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 ZDHHC9Q9Y397 364 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 USP15Q9Y4E8 981 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-224ENST00000494132 MUC3AQ02505 3323 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 SMIM28A0A1B0GU29 152 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 EFEMP2O95967 443 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 CNPP09543 421 aaKnown RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 WEE2P0C1S8 567 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 IDEP14735 1019 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 TNFSF9P41273 254 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 ME1P48163 572 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 GLUD2P49448 558 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 SOX4Q06945 474 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 SPAG1Q07617 926 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 COASYQ13057 564 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 SMAD2Q15796 467 aaKnown RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 ZBTB41Q5SVQ8 909 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 SYCE2Q6PIF2 218 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 ZPBP2Q6X784 338 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 RNF168Q8IYW5 571 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 C12orf76Q8N812 135 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 ZMAT2Q96NC0 199 aaKnown RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 PPP1R10Q96QC0 940 aaKnown RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 MRPL17Q9NRX2 175 aaKnown RBP16.08■□□□□ 0.16
ATG4B-224ENST00000494132 KCNG1Q9UIX4 513 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 IRAK3Q9Y616 596 aa16.08■□□□□ 0.16
ATG4B-224ENST00000494132 MYO10Q9HD67 2058 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-224ENST00000494132 H0YCG3 227 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 CLDN3O15551 220 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 CUTAO60888 179 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 LILRB3O75022 631 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 BRD1O95696 1058 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 SRGAP2BP0DMP2 458 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 CXCL8P10145 99 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 KLRC2P26717 231 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 CLCNKBP51801 687 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 E2F4Q16254 413 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 KIAA1841Q6NSI8 718 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 SLC39A4Q6P5W5 647 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 PRSS55Q6UWB4 352 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-224ENST00000494132 TMEM184AQ6ZMB5 413 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 GJD3Q8N144 294 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 CASP10Q92851 521 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 FGFBP2Q9BYJ0 223 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 TOPORSQ9NS56 1045 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-224ENST00000494132 FAM50BQ9Y247 325 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 DENND4AQ7Z401 1863 aa16.07■□□□□ 0.16
ATG4B-224ENST00000494132 FSD2A1L4K1 749 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 ANKRD63C9JTQ0 380 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 I3L4J1 428 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 RPL17P18621 184 aaKnown RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 GTF2BQ00403 316 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 DSG1Q02413 1049 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 ZP2Q05996 745 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 MCL1Q07820 350 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 SLC10A6Q3KNW5 377 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 RTP2Q5QGT7 225 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 RARS2Q5T160 578 aaKnown RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 FAM171A1Q5VUB5 890 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 KIAA0319Q5VV43 1072 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 ALKAL1Q6UXT8 129 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 CEP57Q86XR8 500 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 C3orf58Q8NDZ4 430 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 KCNG4Q8TDN1 519 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 SLC22A17Q8WUG5 538 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 RIN2Q8WYP3 895 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 C18orf25Q96B23 403 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 EMILIN2Q9BXX0 1053 aa16.06■□□□□ 0.16
ATG4B-224ENST00000494132 MRPL44Q9H9J2 332 aaKnown RBP16.06■□□□□ 0.16
ATG4B-224ENST00000494132 SCN1AP35498 2009 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms