RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 THAP2Q9H0W7 228 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 OSGEPQ9NPF4 335 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 ERAP1Q9NZ08 941 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 SUCLA2Q9P2R7 463 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 KAT6AQ92794 2004 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 UMODL1Q5DID0 1318 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 ANKRD62A6NC57 917 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 OGTO15294 1046 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 CYP26A1O43174 497 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 ADCY6O43306 1168 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 STRNO43815 780 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 TOM1L1O75674 476 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 TBC1D8O95759 1140 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 GJB1P08034 283 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 MMP3P08254 477 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 ABCB4P21439 1286 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 MAPK4P31152 587 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 USP8P40818 1118 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 MATR3P43243 847 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 DNA2P51530 1060 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 GRM1Q13255 1194 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 BIRC3Q13489 604 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 PRPF4BQ13523 1007 aaKnown RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 TFDP1Q14186 410 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 TCEAL1Q15170 157 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF484Q5JVG2 852 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 EEF1DP3Q658K8 133 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 SLC47A2Q86VL8 602 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 SPATA4Q8NEY3 305 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 OR5B17Q8NGF7 314 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 DDX1Q92499 740 aaKnown RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 ISCUQ9H1K1 167 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 APOBEC3GQ9HC16 384 aaKnown RBP11.47□□□□□ -0.57
CLCN6-208ENST00000494028 ACP6Q9NPH0 428 aa11.47□□□□□ -0.57
CLCN6-208ENST00000494028 PASKQ96RG2 1323 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 FAM170AA1A519 330 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 SLC15A5A6NIM6 579 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 B4GALT5O43286 388 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 BUB1BO60566 1050 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 SASH3O75995 380 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 MTA2O94776 668 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 MMEP08473 750 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 CLTAP09496 248 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 INSRRP14616 1297 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 CYP11B1P15538 503 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 TNNI1P19237 187 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ACO1P21399 889 aaKnown RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 PTENP60484 403 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 CDR2Q01850 454 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 MAPK6Q16659 721 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 PTPROQ16827 1216 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 LONRF2Q1L5Z9 754 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF568Q3ZCX4 644 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 SPOPLQ6IQ16 392 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 C11orf63Q6NUN7 778 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 EFCAB12Q6NXP0 572 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 MPZL3Q6UWV2 235 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ZBTB33Q86T24 672 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 NT5DC3Q86UY8 548 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 RHPN2Q8IUC4 686 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 WDR49Q8IV35 697 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 UBR7Q8N806 425 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 RUBCNQ92622 972 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 MS4A14Q96JA4 679 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF668Q96K58 619 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 C16orf70Q9BSU1 422 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 CDT1Q9H211 546 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 FZD8Q9H461 694 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ABCB6Q9NP58 842 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ZHX1Q9UKY1 873 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-208ENST00000494028 COG5Q9UP83 839 aa11.46□□□□□ -0.57
CLCN6-208ENST00000494028 ACKR2O00590 384 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 CLDN3O15551 220 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
CLCN6-208ENST00000494028 RTN2O75298 545 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 TUBBP07437 444 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 HOXC6P09630 235 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 SRGAP2CP0DJJ0 459 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 SMPD1P17405 629 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 PAFAH1B1P43034 410 aa11.45□□□□□ -0.58
CLCN6-208ENST00000494028 PHKA2P46019 1235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms