RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 KRBA2Q6ZNG9 492 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 TRMT1LQ7Z2T5 733 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 SMRP1Q8NCR6 262 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 LARP4BQ92615 738 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 RAD54LQ92698 747 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 EDAQ92838 391 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 SNX27Q96L92 541 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 NUP62CLQ9H1M0 184 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 CUEDC2Q9H467 287 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 ERVK-5Q9HDB9 667 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 ALG13Q9NP73 1137 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 PLAGL2Q9UPG8 496 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 GINS2Q9Y248 185 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 PCDHB7Q9Y5E2 793 aa13.41□□□□□ -0.26
UPF3A-210ENST00000493727 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
UPF3A-210ENST00000493727 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 FSD2A1L4K1 749 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 DENND3A2RUS2 1198 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 ARHGEF35A5YM69 484 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 E9PMD0 336 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 SLFN14P0C7P3 912 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 PLA2G4BP0C869 781 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 DNAJB1P25685 340 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 TMOD1P28289 359 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
UPF3A-210ENST00000493727 PRKCEQ02156 737 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 CLN3Q13286 438 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 CCDC183Q5T5S1 534 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 KANK3Q6NY19 840 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 SLC24A5Q71RS6 500 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 SV2BQ7L1I2 683 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 PIGOQ8TEQ8 1089 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 CLEC1BQ9P126 229 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 DNMT3LQ9UJW3 386 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 FAM186AA6NE01 2351 aa13.4□□□□□ -0.26
UPF3A-210ENST00000493727 ZFHX2Q9C0A1 2572 aaPredicted RBP13.4□□□□□ -0.26
UPF3A-210ENST00000493727 A0A087WWV3 80 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 LYPLA2O95372 231 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 C22orf31O95567 290 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 GLP2RO95838 553 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 ITGB1P05556 798 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 KRT18P05783 430 aaKnown RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 YWHABP31946 246 aaKnown RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 AFMP43652 599 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 AMPD3Q01432 767 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 UBE3AQ05086 875 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 COASYQ13057 564 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 CAMK4Q16566 473 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 PAN2Q504Q3 1202 aaKnown RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 XKR3Q5GH77 459 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 OTUD6AQ7L8S5 288 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 ADGRD2Q7Z7M1 963 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 METTL13Q8N6R0 699 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 ADAM2Q99965 735 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 RAB6BQ9NRW1 208 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 RGS18Q9NS28 235 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
UPF3A-210ENST00000493727 PCDHB12Q9Y5F1 795 aa13.39□□□□□ -0.27
UPF3A-210ENST00000493727 TMEM221A6NGB7 291 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 SOBPA7XYQ1 873 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 M0R296 226 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 ZNF862O60290 1169 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 CSPG5O95196 566 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 IL2RAP01589 272 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 ATP4AP20648 1035 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 NDUFV1P49821 464 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 TCF15Q12870 199 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 XKR9Q5GH70 373 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 SPOUT1Q5T280 376 aaKnown RBP13.38□□□□□ -0.27
UPF3A-210ENST00000493727 PLA2G4FQ68DD2 849 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 RNF217Q8TC41 542 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 SPPL3Q8TCT6 385 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 BHMT2Q9H2M3 363 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
UPF3A-210ENST00000493727 ETNK1Q9HBU6 452 aa13.38□□□□□ -0.27
UPF3A-210ENST00000493727 POLMQ9NP87 494 aaPredicted RBP13.38□□□□□ -0.27
UPF3A-210ENST00000493727 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms