RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 SLC27A1Q6PCB7 646 aa15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 CEP120Q8N960 986 aa15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 ZNF397Q8NF99 534 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 ANKRD7Q92527 254 aa15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 CCDC51Q96ER9 411 aa15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 TMEM117Q9H0C3 514 aa15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 PLCB1Q9NQ66 1216 aa15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 PIN4Q9Y237 131 aaKnown RBP15.26■□□□□ 0.03
PDZRN3-210ENST00000492909 RNF225M0QZC1 329 aaPredicted RBP15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 EPHB6O15197 1021 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 CAND2O75155 1236 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 CLTAP09496 248 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 TNNI1P19237 187 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 KRT9P35527 623 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 OSTNP61366 133 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 MGAT3Q09327 533 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 SURF1Q15526 300 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 TRIM65Q6PJ69 517 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 NYAP1Q6ZVC0 841 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 PANX2Q96RD6 677 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 EDEM3Q9BZQ6 932 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 RPF1Q9H9Y2 349 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-210ENST00000492909 RPS6KA5O75582 802 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 WNT7BP56706 349 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 ZBED6P86452 979 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 POU5F1Q01860 360 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 TRIM71Q2Q1W2 868 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CACNA2D4Q7Z3S7 1137 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 UBE2Q1Q7Z7E8 422 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 FAM228AQ86W67 206 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CCAR2Q8N163 923 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 ANKLE1Q8NAG6 615 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CCDC112Q8NEF3 446 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CGRRF1Q99675 332 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CEP72Q9P209 647 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 USP27XA6NNY8 438 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 NOL4O94818 638 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 IL18RAPO95256 599 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 NPTXRO95502 500 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 STAG3L1P0CL83 205 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 ACTN1P12814 892 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CDK7P50613 346 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 PTPN14Q15678 1187 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 ENOX2Q16206 610 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 KLHDC7AQ5VTJ3 777 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 SV2AQ7L0J3 742 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 OR8K1Q8NGG5 319 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 GANQ9H2C0 597 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 ABHD10Q9NUJ1 306 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 COQ4Q9Y3A0 265 aa15.24■□□□□ 0.03
PDZRN3-210ENST00000492909 CXCL8P10145 99 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 COL6A1P12109 1028 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 GRM5P41594 1212 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 KCNJ6P48051 423 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 AP3M2P53677 418 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 ATN1P54259 1190 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 POLR2FP61218 127 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 APBA1Q02410 837 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 TSR1Q2NL82 804 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 FAM26DQ5JW98 314 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 LMBRD2Q68DH5 695 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 DPY19L2P1Q6NXN4 242 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 NECAB2Q7Z6G3 386 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 WDR49Q8IV35 697 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 TMEM192Q8IY95 271 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 EHBP1Q8NDI1 1231 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 ZNF516Q92618 1163 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 DNAJC7Q99615 494 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 INTS2Q9H0H0 1204 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 SIX2Q9NPC8 291 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 FBXL5Q9UKA1 691 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 RALGAPA2Q2PPJ7 1873 aa15.23■□□□□ 0.03
PDZRN3-210ENST00000492909 TRIP11Q15643 1979 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 GPR182O15218 404 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 CKBP12277 381 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 UCHL3P15374 230 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 ZACNQ401N2 412 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 FBXO47Q5MNV8 452 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 ZNF618Q5T7W0 954 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 C15orf39Q6ZRI6 1047 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 LMO3Q8TAP4 145 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 ACAP3Q96P50 834 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 BAG1Q99933 345 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 EIF2AQ9BY44 585 aaKnown RBP15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 TMX1Q9H3N1 280 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 NLRC4Q9NPP4 1024 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 ST3GAL5Q9UNP4 418 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
PDZRN3-210ENST00000492909 KIF2AO00139 706 aaPredicted RBP15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 C4BPAP04003 597 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms