RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 LMAN1LQ9HAT1 526 aa17.37■□□□□ 0.37
CDK11A-220ENST00000492390 HCFC1R1Q9NWW0 138 aa17.37■□□□□ 0.37
CDK11A-220ENST00000492390 ZMYM2Q9UBW7 1377 aa17.37■□□□□ 0.37
CDK11A-220ENST00000492390 RALGAPA1Q6GYQ0 2036 aa17.37■□□□□ 0.37
CDK11A-220ENST00000492390 TSPAN1O60635 241 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
CDK11A-220ENST00000492390 HOXB3P14651 431 aaPredicted RBP17.36■□□□□ 0.37
CDK11A-220ENST00000492390 CPA1P15085 419 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 MCM2P49736 904 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 HSP90AA2PQ14568 343 aaPredicted RBP17.36■□□□□ 0.37
CDK11A-220ENST00000492390 Q4G0T1 1027 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 TANGO2Q6ICL3 276 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 TCP11Q8WWU5 503 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 ING5Q8WYH8 240 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 TMEM143Q96AN5 459 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 MCRS1Q96EZ8 462 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 APOL6Q9BWW8 343 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 TRIM6Q9C030 488 aaPredicted RBP17.36■□□□□ 0.37
CDK11A-220ENST00000492390 BRD9Q9H8M2 597 aa17.36■□□□□ 0.37
CDK11A-220ENST00000492390 NOTCH4Q99466 2003 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 K7ELQ4 463 aaPredicted RBP17.35■□□□□ 0.37
CDK11A-220ENST00000492390 DKC1O60832 514 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDK11A-220ENST00000492390 RFC5P40937 340 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 NPEPPSP55786 919 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 SATB1Q01826 763 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 RAB33AQ14088 237 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 AASDHQ4L235 1098 aaPredicted RBP17.35■□□□□ 0.37
CDK11A-220ENST00000492390 FAM171A1Q5VUB5 890 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 LONP2Q86WA8 852 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 CEP57Q86XR8 500 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 FAM3CQ92520 227 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 RABGGTAQ92696 567 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 IRF7Q92985 503 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 TRPV5Q9NQA5 729 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
CDK11A-220ENST00000492390 PDRG1Q9NUG6 133 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 ANKRD11Q6UB99 2663 aaPredicted RBP17.35■□□□□ 0.37
CDK11A-220ENST00000492390 PKD1L2Q7Z442 2459 aa17.35■□□□□ 0.37
CDK11A-220ENST00000492390 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 CHURC1-FNTBB4DL54 471 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 ADD1P35611 737 aaKnown RBP17.34■□□□□ 0.37
CDK11A-220ENST00000492390 FNTBP49356 437 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 EXOSC10Q01780 885 aaKnown RBP17.34■□□□□ 0.37
CDK11A-220ENST00000492390 ELAVL2Q12926 359 aaKnown RBP17.34■□□□□ 0.37
CDK11A-220ENST00000492390 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 SPEM1Q8N4L4 309 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 CPB2Q96IY4 423 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 CEP170P1Q96L14 293 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 TRMT61BQ9BVS5 477 aaKnown RBP17.34■□□□□ 0.37
CDK11A-220ENST00000492390 NXF3Q9H4D5 531 aaKnown RBP17.34■□□□□ 0.37
CDK11A-220ENST00000492390 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
CDK11A-220ENST00000492390 ZFYVE26Q68DK2 2539 aa17.34■□□□□ 0.37
CDK11A-220ENST00000492390 KLF18A0A0U1RQI7 1052 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 ADAM12O43184 909 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 PRPF3O43395 683 aaKnown RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 PAPSS2O95340 614 aaPredicted RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 RHOP08100 348 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 CHRNB1P11230 501 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 AKAP5P24588 427 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 QARSP47897 775 aaKnown RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 PTENP60484 403 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 TUSC3Q13454 348 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 DHX32Q7L7V1 743 aaKnown RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 FAM160A2Q8N612 972 aaPredicted RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 C12orf50Q8NA57 414 aaPredicted RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
CDK11A-220ENST00000492390 CCDC148Q8NFR7 591 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 PAAF1Q9BRP4 392 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 ZFP14Q9HCL3 533 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 ZMIZ1Q9ULJ6 1067 aa17.33■□□□□ 0.36
CDK11A-220ENST00000492390 FRYQ5TBA9 3013 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 CYP3A7-CYP3A51PA0A087WV96 503 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 FCARP24071 287 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 CYP3A7P24462 503 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 OR1D2P34982 312 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 POU5F1BQ06416 359 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
CDK11A-220ENST00000492390 GAS6Q14393 721 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 GRM2Q14416 872 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 SLC5A9Q2M3M2 681 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 POTEHQ6S545 545 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 UNQ6494/PRO21346Q6UXR6 183 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 CEP68Q76N32 757 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
CDK11A-220ENST00000492390 MAP4K3Q8IVH8 894 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 KDF1Q8NAX2 398 aaPredicted RBP17.32■□□□□ 0.36
CDK11A-220ENST00000492390 HASPINQ8TF76 798 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 ZNF334Q9HCZ1 680 aaPredicted RBP17.32■□□□□ 0.36
CDK11A-220ENST00000492390 PIAS3Q9Y6X2 628 aa17.32■□□□□ 0.36
CDK11A-220ENST00000492390 INO80B-WBP1J3KQ70 363 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 KIF4AO95239 1232 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 KCNK5O95279 499 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 ZNF806P0C7X5 589 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 CEBPBP17676 345 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 PTPN2P17706 415 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 ARF4P18085 180 aaPredicted RBP17.31■□□□□ 0.36
CDK11A-220ENST00000492390 MLLT6P55198 1093 aaPredicted RBP17.31■□□□□ 0.36
CDK11A-220ENST00000492390 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
CDK11A-220ENST00000492390 EMC2Q15006 297 aa17.31■□□□□ 0.36
CDK11A-220ENST00000492390 ANKRD1Q15327 319 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms