RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CLTAP09496 248 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CXCL8P10145 99 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 IRS1P35568 1242 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 FAM160A1Q05DH4 1040 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 POSTNQ15063 836 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 NAB2Q15742 525 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TCEAL5Q5H9L2 206 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PDE12Q6L8Q7 609 aaKnown RBP17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 KANK3Q6NY19 840 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 EPM2AIP1Q7L775 607 aaPredicted RBP17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TMEM87AQ8NBN3 555 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 POMGNT1Q8WZA1 660 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PPP1R10Q96QC0 940 aaKnown RBP17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ENTPD7Q9NQZ7 604 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 MARCH5Q9NX47 278 aa17.76■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 FSCN2O14926 492 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 MEFVO15553 781 aaPredicted RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 RPN1P04843 607 aaKnown RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TNFSF9P41273 254 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ERVFC1P60507 584 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SNW1Q13573 536 aaKnown RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SKIV2LQ15477 1246 aaKnown RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SLC10A6Q3KNW5 377 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 KMT5BQ4FZB7 885 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ZBTB41Q5SVQ8 909 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PLPP4Q5VZY2 271 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ENGASEQ8NFI3 743 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 MICAL1Q8TDZ2 1067 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TCF25Q9BQ70 676 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 COLEC11Q9BWP8 271 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 RPF1Q9H9Y2 349 aaKnown RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PLEKHA5Q9HAU0 1116 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SLC39A2Q9NP94 309 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CACNG4Q9UBN1 327 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 AGO2Q9UKV8 859 aaKnown RBP17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TRANK1O15050 2925 aa17.75■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PRRC2BQ5JSZ5 2229 aaKnown RBP17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 KCNE1P15382 129 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 GARTP22102 1010 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ADSSP30520 456 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PPP2R3AQ06190 1150 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 DPYDQ12882 1025 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TMC7Q7Z402 723 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ZNF507Q8TCN5 953 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CCDC47Q96A33 483 aaKnown RBP17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ZMAT2Q96NC0 199 aaKnown RBP17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ZBP1Q9H171 429 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 NGRNQ9NPE2 291 aaKnown RBP17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SLC38A7Q9NVC3 462 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CPSF3Q9UKF6 684 aaKnown RBP17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PCDHGC5Q9Y5F6 944 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CITO14578 2027 aa17.74■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 F8W810 466 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 GADD45BO75293 160 aaPredicted RBP17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ACOT2P49753 483 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PSMD2Q13200 908 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SMC1AQ14683 1233 aaKnown RBP17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 BMS1Q14692 1282 aaKnown RBP17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 BMT2Q1RMZ1 405 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ARMCX5Q6P1M9 558 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SCFD1Q8WVM8 642 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 RABGGTAQ92696 567 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 UROC1Q96N76 676 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PAAF1Q9BRP4 392 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 VN1R3Q9BXE9 311 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ADAM28Q9UKQ2 775 aa17.73■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CTSAP10619 480 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 HOXD13P35453 343 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 HYAL1Q12794 435 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ADGRD2Q7Z7M1 963 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 NELFCDQ8IXH7 590 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 KIF12Q96FN5 646 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TIGD1Q96MW7 591 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CBWD1Q9BRT8 395 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 HERC2P3Q9BVR0 1158 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 PDCD11Q14690 1871 aaKnown RBP17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 LACTBL1A8MY62 500 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 TADA2AO75478 443 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 RHOBTB3O94955 611 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 KIF4AO95239 1232 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 LDHAP00338 332 aaKnown RBP17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 SOD2P04179 222 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 ADRB2P07550 413 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 CA8P35219 290 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 POU5F1Q01860 360 aaKnown RBP17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 STK4Q13043 487 aa17.71■□□□□ 0.43
MSH5-SAPCD1-206ENST00000491552 FUT10Q6P4F1 479 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms