RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 NXPE3Q969Y0 559 aa17.19■□□□□ 0.34
COL2A1-207ENST00000490609 NACC1Q96RE7 527 aa17.19■□□□□ 0.34
COL2A1-207ENST00000490609 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
COL2A1-207ENST00000490609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL2A1-207ENST00000490609 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
COL2A1-207ENST00000490609 NUMBLQ9Y6R0 609 aa17.19■□□□□ 0.34
COL2A1-207ENST00000490609 F5P12259 2224 aa17.19■□□□□ 0.34
COL2A1-207ENST00000490609 PARM1Q6UWI2 310 aa17.18■□□□□ 0.34
COL2A1-207ENST00000490609 GET4Q7L5D6 327 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-207ENST00000490609 GRASPQ7Z6J2 395 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-207ENST00000490609 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
COL2A1-207ENST00000490609 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
COL2A1-207ENST00000490609 TTPALQ9BTX7 342 aa17.18■□□□□ 0.34
COL2A1-207ENST00000490609 TBC1D17Q9HA65 648 aa17.18■□□□□ 0.34
COL2A1-207ENST00000490609 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
COL2A1-207ENST00000490609 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL2A1-207ENST00000490609 N4BP3O15049 544 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-207ENST00000490609 LRRN2O75325 713 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 PRKCBP05771 671 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 THP07101 528 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 PRPF4BQ13523 1007 aaKnown RBP17.17■□□□□ 0.34
COL2A1-207ENST00000490609 PSMD5Q16401 504 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 HACE1Q8IYU2 909 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 MAML2Q8IZL2 1156 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-207ENST00000490609 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 ITFG1Q8TB96 612 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 NKD2Q969F2 451 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-207ENST00000490609 PIDD1Q9HB75 910 aa17.17■□□□□ 0.34
COL2A1-207ENST00000490609 DCNP07585 359 aaKnown RBP17.16■□□□□ 0.34
COL2A1-207ENST00000490609 FGFR3P22607 806 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 FSHRP23945 695 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 NAMPTP43490 491 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 GPC5P78333 572 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 SOX4Q06945 474 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-207ENST00000490609 NBR1Q14596 966 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 ALKAL1Q6UXT8 129 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 TAS1R3Q7RTX0 852 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 CEP57Q86XR8 500 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 HCFC1R1Q9NWW0 138 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 ANK1P16157 1881 aa17.16■□□□□ 0.34
COL2A1-207ENST00000490609 SHISA7A6NL88 538 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-207ENST00000490609 CCL16O15467 120 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 C8AP07357 584 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 OR52Z1P0C646 297 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-207ENST00000490609 CLCNKBP51801 687 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 RAB33AQ14088 237 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 IL17AQ16552 155 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 MAPK6Q16659 721 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 XKR4Q5GH76 650 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 DAW1Q8N136 415 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 CEP120Q8N960 986 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 FGF13Q92913 245 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
COL2A1-207ENST00000490609 FOXQ1Q9C009 403 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 C2orf40Q9H1Z8 148 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 GOLGA2P5Q9HBQ8 144 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 PTPRHQ9HD43 1115 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 DNMT3BQ9UBC3 853 aaKnown RBP17.15■□□□□ 0.34
COL2A1-207ENST00000490609 CDH7Q9ULB5 785 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 GDAQ9Y2T3 454 aa17.15■□□□□ 0.34
COL2A1-207ENST00000490609 MTF2Q9Y483 593 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-207ENST00000490609 TMEM189-UBE2V1I3L0A0 370 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 ABLIM1O14639 778 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 HNRNPA1P09651 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
COL2A1-207ENST00000490609 HOXA9P31269 272 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 OR1D2P34982 312 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 STARD6P59095 220 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 CREMQ03060 361 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 UPP1Q16831 310 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 GLRA4Q5JXX5 417 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 ELMSAN1Q6PJG2 1045 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 FBXO18Q8NFZ0 1043 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
COL2A1-207ENST00000490609 KIF2CQ99661 725 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 DDX23Q9BUQ8 820 aaKnown RBP17.14■□□□□ 0.33
COL2A1-207ENST00000490609 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
COL2A1-207ENST00000490609 ARHGEF3Q9NR81 526 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 MTRRQ9UBK8 725 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 R4GN57 208 aa17.14■□□□□ 0.33
COL2A1-207ENST00000490609 COL4A2P08572 1712 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 I3L4J1 428 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 TBC1D4O60343 1298 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 POU2F2P09086 479 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 LIG1P18858 919 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
COL2A1-207ENST00000490609 BRCC3P46736 316 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
COL2A1-207ENST00000490609 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL2A1-207ENST00000490609 TRIM29Q14134 588 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 AXDND1Q5T1B0 1012 aaPredicted RBP17.13■□□□□ 0.33
COL2A1-207ENST00000490609 DCLRE1AQ6PJP8 1040 aa17.13■□□□□ 0.33
COL2A1-207ENST00000490609 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.13■□□□□ 0.33
COL2A1-207ENST00000490609 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms