RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TMEM132AQ24JP5 1023 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 DCAF4L1Q3SXM0 396 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 HYIQ5T013 277 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 KRT79Q5XKE5 535 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ALKAL1Q6UXT8 129 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CEP120Q8N960 986 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PNMA5Q96PV4 448 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ACO2Q99798 780 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 RAB34Q9BZG1 259 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TMEM134Q9H6X4 195 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 KCNK12Q9HB15 430 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 DPP7Q9UHL4 492 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 MYH11P35749 1972 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ABLIM1O14639 778 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ADAM12O43184 909 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ST18O60284 1047 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 GJB2P29033 226 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 RILPL1Q5EBL4 403 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 XKR4Q5GH76 650 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 FAM171A1Q5VUB5 890 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PIK3R5Q8WYR1 880 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TTPALQ9BTX7 342 aa21.35■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CACNA1HO95180 2353 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CLUHO75153 1309 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CCDC169A6NNP5 214 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 MEFVO15553 781 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PROZP22891 400 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PTPN5P54829 565 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 GLRA4Q5JXX5 417 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 MCTP1Q6DN14 999 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 SMG7Q92540 1137 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 MYADMQ96S97 322 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PRRX2Q99811 253 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 NTPCRQ9BSD7 190 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PRKD2Q9BZL6 878 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CDT1Q9H211 546 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ZDHHC7Q9NXF8 308 aa21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 DAXXQ9UER7 740 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PHLPP2Q6ZVD8 1323 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 SFI1A8K8P3 1242 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TMEM189-UBE2V1I3L0A0 370 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CLCNKBP51801 687 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CREMQ03060 361 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 SOX4Q06945 474 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TDGQ13569 410 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TMEM105Q8N8V8 129 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 C3orf58Q8NDZ4 430 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TARS2Q9BW92 718 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 GOLGA2P5Q9HBQ8 144 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 EPS15L1Q9UBC2 864 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 FBXW11Q9UKB1 542 aa21.33■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CITO14578 2027 aa21.33■■□□□ 1
TNFRSF1B-202ENST00000489921 WDR87Q6ZQQ6 2873 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 SMIM28A0A1B0GU29 152 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 ZMYND10O75800 440 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 FGFR3P22607 806 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 GUCY2CP25092 1073 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 GRM5P41594 1212 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 PSMD5Q16401 504 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 UPP1Q16831 310 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 ELMSAN1Q6PJG2 1045 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 RSPO2Q6UXX9 243 aaPredicted RBP21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 CEP57Q86XR8 500 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 RSAD2Q8WXG1 361 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 DRC1Q96MC2 740 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 ZMAT2Q96NC0 199 aaKnown RBP21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 KMT5AQ9NQR1 393 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 DUSP12Q9UNI6 340 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 KIF3AQ9Y496 699 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 NOTCH4Q99466 2003 aa21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 PDCD11Q14690 1871 aaKnown RBP21.32■■□□□ 1
TNFRSF1B-202ENST00000489921 SLC16A4O15374 487 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 NPR3P17342 541 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 SLC12A3P55017 1021 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 DMP1Q13316 513 aaPredicted RBP21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 DCLRE1AQ6PJP8 1040 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 SYT2Q8N9I0 419 aaPredicted RBP21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 LRRC15Q8TF66 581 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 ZBTB45Q96K62 511 aaPredicted RBP21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 PLIN2Q99541 437 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 MRPL4Q9BYD3 311 aaKnown RBP21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 C17orf75Q9HAS0 396 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 IGSF9Q9P2J2 1179 aa21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
TNFRSF1B-202ENST00000489921 CFAP54Q96N23 3096 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 VWA3AA6NCI4 1184 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 NARSO43776 548 aaKnown RBP21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 OSTNP61366 133 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 ELAVL2Q12926 359 aaKnown RBP21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 TMEM119Q4V9L6 283 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 ARSHQ5FYA8 562 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 TMEM161BQ8NDZ6 487 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 TIPINQ9BVW5 301 aa21.3■■□□□ 1
TNFRSF1B-202ENST00000489921 B3GAT3O94766 335 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 GBP2P32456 591 aaPredicted RBP21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 NUBP1P53384 320 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 ZRSR1Q15695 479 aaKnown RBP21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 ZNF568Q3ZCX4 644 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms