RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 DEPTORQ8TB45 409 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 LNX1Q8TBB1 728 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 PIK3R5Q8WYR1 880 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 NECTIN4Q96NY8 510 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 TARS2Q9BW92 718 aaKnown RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
SRSF4-204ENST00000489898 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
SRSF4-204ENST00000489898 MYO16Q9Y6X6 1858 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 TMEM221A6NGB7 291 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 SFI1A8K8P3 1242 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 M0R296 226 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 TGM5O43548 720 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 ASGR2P07307 311 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 SRGAP2BP0DMP2 458 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 FGFR3P22607 806 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 EFNA5P52803 228 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
SRSF4-204ENST00000489898 UPP1Q16831 310 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 KRT79Q5XKE5 535 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 ZDHHC14Q8IZN3 488 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 SPIRE2Q8WWL2 714 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
SRSF4-204ENST00000489898 REEP2Q9BRK0 252 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
SRSF4-204ENST00000489898 MRPL17Q9NRX2 175 aaKnown RBP13□□□□□ -0.33
SRSF4-204ENST00000489898 CNTN3Q9P232 1028 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 STK39Q9UEW8 545 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 PARP2Q9UGN5 583 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 USTQ9Y2C2 406 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 GDAQ9Y2T3 454 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 ANAPC1Q9H1A4 1944 aa13□□□□□ -0.33
SRSF4-204ENST00000489898 SF3B1O75533 1304 aaKnown RBP eCLIP12.99□□□□□ -0.332e-7■□□□□ 10.8
SRSF4-204ENST00000489898 A0A087X0B3 334 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 SLC16A4O15374 487 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 TBC1D4O60343 1298 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 C1RP00736 705 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 PLA2G4BP0C869 781 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 PLS3P13797 630 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 PLCG1P19174 1290 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 MTHFRP42898 656 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 CLCNKBP51801 687 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 SIGLEC14Q08ET2 396 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 ZBTB41Q5SVQ8 909 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 IER5LQ5T953 404 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 CWF19L1Q69YN2 538 aaKnown RBP12.99□□□□□ -0.33
SRSF4-204ENST00000489898 MCTP1Q6DN14 999 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
SRSF4-204ENST00000489898 PLIN2Q99541 437 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 IKZF4Q9H2S9 585 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 SMC3Q9UQE7 1217 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 MTMR6Q9Y217 621 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 CLIC4Q9Y696 253 aa12.99□□□□□ -0.33
SRSF4-204ENST00000489898 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
SRSF4-204ENST00000489898 CLUHO75153 1309 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 SMIM28A0A1B0GU29 152 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 PPP1R37O75864 691 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 GLUD1P00367 558 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 PIGRP01833 764 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 THP07101 528 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 ADH1AP07327 375 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 KCNE1P15382 129 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 LIG1P18858 919 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 TCF15Q12870 199 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
SRSF4-204ENST00000489898 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
SRSF4-204ENST00000489898 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
SRSF4-204ENST00000489898 SLC10A6Q3KNW5 377 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 USP41Q3LFD5 358 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 ZNF568Q3ZCX4 644 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 SEZ6Q53EL9 994 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 CABP7Q86V35 215 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
SRSF4-204ENST00000489898 C18orf25Q96B23 403 aaPredicted RBP12.98□□□□□ -0.33
SRSF4-204ENST00000489898 DRC1Q96MC2 740 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 MYADMQ96S97 322 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 TIPINQ9BVW5 301 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 C17orf75Q9HAS0 396 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 WDR6Q9NNW5 1121 aaKnown RBP12.98□□□□□ -0.33
SRSF4-204ENST00000489898 MTRRQ9UBK8 725 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 DNM3Q9UQ16 869 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
SRSF4-204ENST00000489898 TISP43B9A030 160 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 I3L4J1 428 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 VNN2O95498 520 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 ADRB2P07550 413 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 MYBP10242 640 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 MCF2P10911 925 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 SYT1P21579 422 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 KLRC2P26717 231 aa12.97□□□□□ -0.33
SRSF4-204ENST00000489898 TKTP29401 623 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms