RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-207ENST00000489434 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 POLIQ9UNA4 740 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 NUMBLQ9Y6R0 609 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 DOCK6Q96HP0 2047 aa13.16□□□□□ -0.3
SFXN3-207ENST00000489434 ACKR2O00590 384 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 TRAPPC3O43617 180 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 NEFLP07196 543 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 C8AP07357 584 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 CYP11B2P19099 503 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 RPA1P27694 616 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 NAMPTP43490 491 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
SFXN3-207ENST00000489434 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
SFXN3-207ENST00000489434 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 CLSTN3Q9BQT9 956 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 CACNA1AO00555 2505 aa13.15□□□□□ -0.3
SFXN3-207ENST00000489434 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.31
SFXN3-207ENST00000489434 PTGESO14684 152 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 CCL16O15467 120 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 DCNP07585 359 aaKnown RBP13.14□□□□□ -0.31
SFXN3-207ENST00000489434 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 MUTP22033 750 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 ID4P47928 161 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 NEK4P51957 841 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 PFKPQ01813 784 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
SFXN3-207ENST00000489434 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 LNX1Q8TBB1 728 aaPredicted RBP13.14□□□□□ -0.31
SFXN3-207ENST00000489434 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 FGF13Q92913 245 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 UROC1Q96N76 676 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
SFXN3-207ENST00000489434 DMXL1Q9Y485 3027 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 WNT7AO00755 349 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 JAK2O60674 1132 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 MED24O75448 989 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 B3GAT3O94766 335 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 LARGE1O95461 756 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 POU2F2P09086 479 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 OR1D2P34982 312 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
SFXN3-207ENST00000489434 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
SFXN3-207ENST00000489434 RAB33AQ14088 237 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 PJA1Q8NG27 643 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 HINFPQ9BQA5 517 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 BCO2Q9BYV7 579 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 OTOGLQ3ZCN5 2332 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
SFXN3-207ENST00000489434 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 MIA3Q5JRA6 1907 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 K7ERI5 159 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 FGFR3P22607 806 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
SFXN3-207ENST00000489434 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
SFXN3-207ENST00000489434 STARD6P59095 220 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 GPC5P78333 572 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 NTHL1P78549 312 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 GUCY1B3Q02153 619 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 PRKCQQ04759 706 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 ZNF174Q15697 407 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
SFXN3-207ENST00000489434 ATF7IP2Q5U623 682 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 FGF14Q92915 247 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 RAB34Q9BZG1 259 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
SFXN3-207ENST00000489434 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
SFXN3-207ENST00000489434 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 R4GN57 208 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 PHLPP2Q6ZVD8 1323 aa13.12□□□□□ -0.31
SFXN3-207ENST00000489434 TRIP11Q15643 1979 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 KANSL1LA0AUZ9 987 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 SP9P0CG40 484 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 ELF1P32519 619 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 NAB2Q15742 525 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 MLF2Q15773 248 aaPredicted RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 EEF1DP3Q658K8 133 aa13.11□□□□□ -0.31
SFXN3-207ENST00000489434 ST13P5Q8NFI4 369 aaPredicted RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
SFXN3-207ENST00000489434 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms