RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 CCDC127Q96BQ5 260 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 DEFB118Q96PH6 123 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 PPP1R16BQ96T49 567 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 BAG1Q99933 345 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-206ENST00000489131 CRACR2AQ9BSW2 395 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 INTS2Q9H0H0 1204 aaKnown RBP13.9□□□□□ -0.18
TOP3A-206ENST00000489131 RNF208Q9H0X6 261 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 PLEKHA5Q9HAU0 1116 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 PDE11AQ9HCR9 933 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 APEX2Q9UBZ4 518 aa13.9□□□□□ -0.18
TOP3A-206ENST00000489131 MEFVO15553 781 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-206ENST00000489131 CD4P01730 458 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 STAG3L1P0CL83 205 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 PDXDC1Q6P996 788 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 WDR59Q6PJI9 974 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 TMTC1Q8IUR5 882 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 FAM126BQ8IXS8 530 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 CAGE1Q8TC20 777 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 CPB2Q96IY4 423 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 FAM81BQ96LP2 452 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-206ENST00000489131 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-206ENST00000489131 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
TOP3A-206ENST00000489131 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 DERAQ9Y315 318 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
TOP3A-206ENST00000489131 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
TOP3A-206ENST00000489131 GPR182O15218 404 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 SGPL1O95470 568 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
TOP3A-206ENST00000489131 COL6A1P12109 1028 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 SLC10A6Q3KNW5 377 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 XKR4Q5GH76 650 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 UBXN11Q5T124 520 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
TOP3A-206ENST00000489131 ANKRD33Q7Z3H0 272 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 THNSL1Q8IYQ7 743 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 CEP120Q8N960 986 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 CPLX3Q8WVH0 158 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 FAXDC2Q96IV6 333 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 POP1Q99575 1024 aaKnown RBP13.88□□□□□ -0.19
TOP3A-206ENST00000489131 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
TOP3A-206ENST00000489131 ERVK-5Q9HDB9 667 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 TOPORSQ9NS56 1045 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-206ENST00000489131 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 C2CD2Q9Y426 696 aa13.88□□□□□ -0.19
TOP3A-206ENST00000489131 ESPNB1AK53 854 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-206ENST00000489131 CKBP12277 381 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 ACTN1P12814 892 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 FGFR4P22455 802 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 THPOP40225 353 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
TOP3A-206ENST00000489131 GCNT1Q02742 428 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 GOLGA8FQ08AF8 430 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 GOLGA8DPQ0D2H9 430 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 DUOXA2Q1HG44 320 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 CYP26C1Q6V0L0 522 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 ENOSF1Q7L5Y1 443 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 CACNA2D4Q7Z3S7 1137 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 CDR2LQ86X02 465 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-206ENST00000489131 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 U2AF1L4Q8WU68 220 aaKnown RBP13.87□□□□□ -0.19
TOP3A-206ENST00000489131 SEMA4DQ92854 862 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 JAKMIP2Q96AA8 810 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 TOX2Q96NM4 488 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 ACAP3Q96P50 834 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 CCDC94Q9BW85 323 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-206ENST00000489131 STK33Q9BYT3 514 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 PYCARDQ9ULZ3 195 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 PIN4Q9Y237 131 aaKnown RBP13.87□□□□□ -0.19
TOP3A-206ENST00000489131 NOD1Q9Y239 953 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 FHOD1Q9Y613 1164 aa13.87□□□□□ -0.19
TOP3A-206ENST00000489131 SSU72P8A0A1W2PR75 194 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 LRRC53A6NM62 1247 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 VNN1O95497 513 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 CXCL8P10145 99 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 HARSP12081 509 aaKnown RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 TNNI1P19237 187 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 ANXA13P27216 316 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 PRKCIP41743 596 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 GJA8P48165 433 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 LBX1P52954 281 aa13.86□□□□□ -0.19
TOP3A-206ENST00000489131 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
TOP3A-206ENST00000489131 DSC3Q14574 896 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms