RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SIP14410 1827 aa10.84□□□□□ -0.67
USP11-211ENST00000489111 ARVCFO00192 962 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 TNNC2P02585 160 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 CXCL8P10145 99 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 FECHP22830 423 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 HOXA11P31270 313 aaPredicted RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 GRM5P41594 1212 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 CTCFP49711 727 aaPredicted RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 TFAMQ00059 246 aaKnown RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 POU5F1Q01860 360 aaKnown RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 ASIC2Q16515 512 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 MEA1Q16626 185 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 TMEM139Q8IV31 216 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 CEP120Q8N960 986 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 SLC43A3Q8NBI5 491 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 KIAA1524Q8TCG1 905 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 TAS1R2Q8TE23 839 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 BAP1Q92560 729 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 SYN2Q92777 582 aaPredicted RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 WNT8BQ93098 351 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 ANKRD36BP1Q96IX9 119 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 ACAP3Q96P50 834 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 C1orf112Q9NSG2 853 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 RAB20Q9NX57 234 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 OGDHLQ9ULD0 1010 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 NOC2LQ9Y3T9 749 aaKnown RBP10.83□□□□□ -0.68
USP11-211ENST00000489111 WDR81Q562E7 1941 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 MYH11P35749 1972 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 MROH7Q68CQ1 1323 aa10.83□□□□□ -0.68
USP11-211ENST00000489111 SOWAHDA6NJG2 315 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 GPR182O15218 404 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 CCP110O43303 1012 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 B4GALT4O60513 344 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 ZC3H11AO75152 810 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP11-211ENST00000489111 IPO7O95373 1038 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 HLA-DRAP01903 254 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 CHRNA1P02708 482 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 HNRNPH3P31942 346 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 WNT7BP56706 349 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 PAK2Q13177 524 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 PKN2Q16513 984 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 DUOXA2Q1HG44 320 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 ZACNQ401N2 412 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 TDRD12Q587J7 1177 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 TDRD10Q5VZ19 366 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 TWF2Q6IBS0 349 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 IQCEQ6IPM2 695 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 CD302Q8IX05 232 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 HACE1Q8IYU2 909 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 DHX38Q92620 1227 aaKnown RBP10.82□□□□□ -0.68
USP11-211ENST00000489111 MTMR12Q9C0I1 747 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 TRPV6Q9H1D0 765 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 DEF6Q9H4E7 631 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 ASB7Q9H672 318 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 DNAJC12Q9UKB3 198 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 PLAGL2Q9UPG8 496 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 COQ4Q9Y3A0 265 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
USP11-211ENST00000489111 LACTBL1A8MY62 500 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 F8VZ95 297 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 ZSCAN12O43309 604 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 TFRCP02786 760 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 SERPING1P05155 500 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 GHRP10912 638 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 CYLC1P35663 651 aaPredicted RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 STAT1P42224 750 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 LBX1P52954 281 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 MFAP3P55082 362 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 CDK17Q00537 523 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 ARID5AQ03989 594 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 MGAT3Q09327 533 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 TRPC3Q13507 836 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 NCOA4Q13772 614 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 TMEM132DQ14C87 1099 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 TRIM71Q2Q1W2 868 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 FBXO47Q5MNV8 452 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 DPY19L2P1Q6NXN4 242 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 C15orf39Q6ZRI6 1047 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 TMEM192Q8IY95 271 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 PPM1KQ8N3J5 372 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 OR5B17Q8NGF7 314 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 LMO3Q8TAP4 145 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 U2AF1L4Q8WU68 220 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 ZNF516Q92618 1163 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 SEMA4DQ92854 862 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 ZNF333Q96JL9 665 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms