RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 GIT2Q14161 759 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 SHROOM1Q2M3G4 852 aaPredicted RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 ARHGAP29Q52LW3 1261 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 ARSHQ5FYA8 562 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 KIAA1755Q5JYT7 1200 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 CCDC174Q6PII3 467 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 TRIM65Q6PJ69 517 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 LRRC55Q6ZSA7 311 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 EPM2AIP1Q7L775 607 aaPredicted RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 DYMQ7RTS9 669 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 KCNK18Q7Z418 384 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 NLRX1Q86UT6 975 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 SHISA5Q8N114 240 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 GPRASP2Q96D09 838 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 TANGO6Q9C0B7 1094 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 KCTD10Q9H3F6 313 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 PARVGQ9HBI0 331 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 SPON1Q9HCB6 807 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 ZFYVE28Q9HCC9 887 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 ANKEF1Q9NU02 776 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 TYW1Q9NV66 732 aaKnown RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 TRMT1Q9NXH9 659 aaKnown RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 FBXL5Q9UKA1 691 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 PLAGL2Q9UPG8 496 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 MAPK8IP1Q9UQF2 711 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 BZW2Q9Y6E2 419 aaKnown RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 EPN1Q9Y6I3 576 aaPredicted RBP7.27□□□□□ -1.25
PDCD4-209ENST00000489049 ZNF536O15090 1300 aa7.27□□□□□ -1.25
PDCD4-209ENST00000489049 LOC102724159A0A0B4J2E5 919 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SSU72P8A0A1W2PR75 194 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TTC26A0AVF1 554 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SHTN1A0MZ66 631 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 ARHGEF35A5YM69 484 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TRIM49BA6NDI0 452 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 EIF3CLB5ME19 914 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 E9PMD0 336 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 H0YCG3 227 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 MAPK13O15264 365 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 USO1O60763 962 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 NDUFA10O95299 355 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 PRNPP04156 253 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 CCND2P30279 289 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 FXR1P51114 621 aaKnown RBP eCLIP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 GNG11P61952 73 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SOX4Q06945 474 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SPP2Q13103 211 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 R3HDM1Q15032 1099 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 PWP2Q15269 919 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SPA17Q15506 151 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 CCDC40Q4G0X9 1142 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TBC1D10BQ4KMP7 808 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 HSP90AA4PQ58FG1 418 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 MIIPQ5JXC2 388 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 C10orf76Q5T2E6 689 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 ZNF746Q6NUN9 644 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 RINT1Q6NUQ1 792 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 RNF207Q6ZRF8 634 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 C1orf186Q6ZWK4 172 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 OTUD6AQ7L8S5 288 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 HS2ST1Q7LGA3 356 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TRIM59Q8IWR1 403 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 C4orf19Q8IY42 314 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SMAP1Q8IYB5 467 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 ABI1Q8IZP0 508 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 CHST13Q8NET6 341 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 NEK11Q8NG66 645 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 NSUN6Q8TEA1 469 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 SCFD1Q8WVM8 642 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 EZH1Q92800 747 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 HVCN1Q96D96 273 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 MPHOSPH6Q99547 160 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 P2RX7Q99572 595 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 EIF3CQ99613 913 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TEX13BQ9BXU2 312 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TTYH3Q9C0H2 523 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 PDCL3Q9H2J4 239 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 ST6GALNAC4Q9H4F1 302 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 RPAP3Q9H6T3 665 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 TMEM206Q9H813 350 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 C17orf75Q9HAS0 396 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 PLCB1Q9NQ66 1216 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 ADARB2Q9NS39 739 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 CEP72Q9P209 647 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 LARSQ9P2J5 1176 aaKnown RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 ARMCX3Q9UH62 379 aaPredicted RBP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.26□□□□□ -1.25
PDCD4-209ENST00000489049 LOXHD1Q8IVV2 1947 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 NFASCO94856 1347 aa7.26□□□□□ -1.25
PDCD4-209ENST00000489049 CTAGE9A4FU28 777 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 USP27XA6NNY8 438 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 EFCAB8A8MWE9 144 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 CXCL11O14625 94 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 KRT86O43790 486 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 GFPT2O94808 682 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 LCA5LO95447 670 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 CCDC172P0C7W6 258 aa7.25□□□□□ -1.25
PDCD4-209ENST00000489049 EPB41P11171 864 aaKnown RBP7.25□□□□□ -1.25
PDCD4-209ENST00000489049 ALAS1P13196 640 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms