RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TMPRSS11EQ9UL52 423 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 PPP2R3BQ9Y5P8 575 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 CXorf49A8MYA2 514 aaPredicted RBP4.12□□□□□ -1.75
CCDC93-209ENST00000488908 CTSSP25774 331 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 LSP1P33241 339 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF425Q6IV72 752 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 THNSL2Q86YJ6 484 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 NXPE1Q8N323 547 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 PTCD3Q96EY7 689 aaKnown RBP4.12□□□□□ -1.75
CCDC93-209ENST00000488908 UROC1Q96N76 676 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 BRIP1Q9BX63 1249 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 KCNE5Q9UJ90 142 aa4.12□□□□□ -1.75
CCDC93-209ENST00000488908 WDR91A4D1P6 747 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF891A8MT65 544 aaPredicted RBP4.11□□□□□ -1.75
CCDC93-209ENST00000488908 KPNA6O60684 536 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 PHF2O75151 1096 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 RFPL3O75679 317 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 HOXB6P17509 224 aaKnown RBP4.11□□□□□ -1.75
CCDC93-209ENST00000488908 PTPN7P35236 360 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 MANFP55145 182 aaKnown RBP4.11□□□□□ -1.75
CCDC93-209ENST00000488908 PROK1P58294 105 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 TRIM25Q14258 630 aaKnown RBP4.11□□□□□ -1.75
CCDC93-209ENST00000488908 RRP12Q5JTH9 1297 aaKnown RBP4.11□□□□□ -1.75
CCDC93-209ENST00000488908 FRMD7Q6ZUT3 714 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 GRASPQ7Z6J2 395 aaPredicted RBP4.11□□□□□ -1.75
CCDC93-209ENST00000488908 LYSMD2Q8IV50 215 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 SLC41A1Q8IVJ1 513 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 DRC7Q8IY82 874 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 ANO3Q9BYT9 981 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 KCTD5Q9NXV2 234 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 CDY2AQ9Y6F7 541 aa4.11□□□□□ -1.75
CCDC93-209ENST00000488908 LCHNA4D1U4 455 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 ADCY6O43306 1168 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 ORC4O43929 436 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 GPANK1O95872 356 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 FGFR4P22455 802 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 CANXP27824 592 aaKnown RBP4.1□□□□□ -1.75
CCDC93-209ENST00000488908 NEK4P51957 841 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
CCDC93-209ENST00000488908 RAP2BP61225 183 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 OCRLQ01968 901 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 FOXR2Q6PJQ5 311 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 COLGALT2Q8IYK4 626 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 IL17RBQ9NRM6 502 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 RPTORQ8N122 1335 aa4.1□□□□□ -1.75
CCDC93-209ENST00000488908 PPP1R12AO14974 1030 aaPredicted RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 PEX1O43933 1283 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 GPD1P21695 349 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 HSD11B2P80365 405 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 PABPC4Q13310 644 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 SART3Q15020 963 aaKnown RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 TERF2Q15554 542 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 EZH2Q15910 746 aaKnown RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF572Q7Z3I7 529 aaPredicted RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 LNX2Q8N448 690 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 NACC2Q96BF6 587 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 TIMP4Q99727 224 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 MS4A5Q9H3V2 200 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 UNKLQ9H9P5 680 aaKnown RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 MTO1Q9Y2Z2 717 aaKnown RBP4.09□□□□□ -1.75
CCDC93-209ENST00000488908 PNPLA7Q6ZV29 1317 aa4.09□□□□□ -1.75
CCDC93-209ENST00000488908 WIPF3A6NGB9 483 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 KDM1AO60341 852 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 RAB11FIP3O75154 756 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 CELA2AP08217 269 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 GCSHP23434 173 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 VAV2P52735 878 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 SQSTM1Q13501 440 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 SRSF7Q16629 238 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC93-209ENST00000488908 CYP2A13Q16696 494 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 MST1LQ2TV78 715 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 TRMT2AQ8IZ69 625 aaKnown RBP4.08□□□□□ -1.76
CCDC93-209ENST00000488908 PDPRQ8NCN5 879 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 SMC1BQ8NDV3 1235 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 REPS2Q8NFH8 660 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 PMFBP1Q8TBY8 1022 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 HASPINQ8TF76 798 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 SARAFQ96BY9 339 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 KCTD10Q9H3F6 313 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 ENTPD2Q9Y5L3 495 aa4.08□□□□□ -1.76
CCDC93-209ENST00000488908 AATKQ6ZMQ8 1374 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 CCDC151A5D8V7 595 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 KCNAB3O43448 404 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 POMCP01189 267 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 ALOX15P16050 662 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-209ENST00000488908 WT1P19544 449 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-209ENST00000488908 POU3F2P20265 443 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-209ENST00000488908 FOLR3P41439 243 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 LGALS4P56470 323 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 SP140Q13342 867 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 PITRM1Q5JRX3 1037 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 OR7D4Q8NG98 312 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 SSH3Q8TE77 659 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 DDB2Q92466 427 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 GPR101Q96P66 508 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-209ENST00000488908 MRI1Q9BV20 369 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 PRDM12Q9H4Q4 367 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 CPNE5Q9HCH3 593 aa4.07□□□□□ -1.76
CCDC93-209ENST00000488908 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms