RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PURAQ00577 322 aaKnown RBP19.74■□□□□ 0.75
COL16A1-215ENST00000488897 PRKCEQ02156 737 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 DGKDQ16760 1214 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 TADA2BQ86TJ2 420 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 PPP1R16BQ96T49 567 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 FAM169AQ9Y6X4 670 aa19.74■□□□□ 0.75
COL16A1-215ENST00000488897 HMGB1P1B2RPK0 211 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 H3BRB1 525 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 H2AFZP0C0S5 128 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 QARSP47897 775 aaKnown RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 TCERG1LQ5VWI1 586 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 H2AFVQ71UI9 128 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 B4GALNT4Q76KP1 1039 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 SYCE1Q8N0S2 351 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 SH2D3CQ8N5H7 860 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 TPCN2Q8NHX9 752 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 TUT1Q9H6E5 874 aaKnown RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 SEPT9Q9UHD8 586 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 NENFQ9UMX5 172 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 CCDC188H7C350 402 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 PGRMC1O00264 195 aaKnown RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 TBCAO75347 108 aaKnown RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 P4HBP07237 508 aaKnown RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 JAM2P57087 298 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 PDCLQ13371 301 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 PKN2Q16513 984 aaKnown RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 MTERF2Q49AM1 385 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 TTC19Q6DKK2 380 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 CCSAPQ6IQ19 270 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 LRIG3Q6UXM1 1119 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 ARMC5Q96C12 935 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 ATP6V1G3Q96LB4 118 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.73■□□□□ 0.753e-6■■■■■ 38.8
COL16A1-215ENST00000488897 POLR3CQ9BUI4 534 aaPredicted RBP19.73■□□□□ 0.75
COL16A1-215ENST00000488897 BHMT2Q9H2M3 363 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 AZI2Q9H6S1 392 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 SETD4Q9NVD3 440 aa19.73■□□□□ 0.75
COL16A1-215ENST00000488897 ZEB2O60315 1214 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 STBD1O95210 358 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 GJB1P08034 283 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 FERP16591 822 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 GAP43P17677 238 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 JAK3P52333 1124 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 PLCB4Q15147 1175 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 FAM47CQ5HY64 1035 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SLFN11Q7Z7L1 901 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SPATS2Q86XZ4 545 aaKnown RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 KLHDC9Q8NEP7 349 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SLC35C1Q96A29 364 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 LRRC45Q96CN5 670 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 TRPC6Q9Y210 931 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 MAFBQ9Y5Q3 323 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 MYH9P35579 1960 aaKnown RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 IGKV6D-21A0A0A0MT36 114 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SFI1A8K8P3 1242 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 NDUFAB1O14561 156 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 GFPT2O94808 682 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 GCNT3O95395 438 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SGPL1O95470 568 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 EYA4O95677 639 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 NR1D1P20393 614 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 YWHABP31946 246 aaKnown RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 MNX1P50219 401 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 ATP1A2P50993 1020 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 HLTFQ14527 1009 aaKnown RBP eCLIP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 PEX26Q7Z412 305 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 EMID1Q96A84 441 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SENP6Q9GZR1 1112 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SIX2Q9NPC8 291 aa19.72■□□□□ 0.75
COL16A1-215ENST00000488897 SUCLA2Q9P2R7 463 aaPredicted RBP19.72■□□□□ 0.75
COL16A1-215ENST00000488897 GOLGA6L10A6NI86 522 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 CPT1AP50416 773 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 ACLYP53396 1101 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 TRADDQ15628 312 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 METTL13Q8N6R0 699 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 RNPC3Q96LT9 517 aaKnown RBP19.71■□□□□ 0.75
COL16A1-215ENST00000488897 OLFML3Q9NRN5 406 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 GCNT4Q9P109 453 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 PLAAQ9Y263 795 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 TMCO5BA8MYB1 307 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 SFNP31947 248 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 PSMC5P62195 406 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 DRP2Q13474 957 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 PACS2Q86VP3 889 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 SPC25Q9HBM1 224 aa19.71■□□□□ 0.75
COL16A1-215ENST00000488897 TRIP12Q14669 1992 aaPredicted RBP19.7■□□□□ 0.74
COL16A1-215ENST00000488897 BHMG1C9JSJ3 638 aaPredicted RBP19.7■□□□□ 0.74
COL16A1-215ENST00000488897 SART1O43290 800 aaKnown RBP19.7■□□□□ 0.74
COL16A1-215ENST00000488897 INSRRP14616 1297 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 STAT1P42224 750 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 RNF180Q86T96 592 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 RASGEF1CQ8N431 466 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 EPN3Q9H201 632 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 GPRC5CQ9NQ84 441 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 ATXN2Q99700 1313 aaKnown RBP19.7■□□□□ 0.74
COL16A1-215ENST00000488897 RSPH10B2B2RC85 870 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 RSPH10BP0C881 870 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 CASP4P49662 377 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms