RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GUCY1A2P33402 732 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 WASP42768 502 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 SLC6A9P48067 706 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 FOXE3Q13461 319 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 TTF1Q15361 905 aaPredicted RBP5.23□□□□□ -1.57
SSR1-209ENST00000488834 C3orf36Q3SXR2 165 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 RABL3Q5HYI8 236 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 ODR4Q5SWX8 454 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 ZNF529Q6P280 563 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 GADL1Q6ZQY3 521 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 DRC7Q8IY82 874 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 STAG1Q8WVM7 1258 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 CASKIN2Q8WXE0 1202 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 COA7Q96BR5 231 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 HSPBAP1Q96EW2 488 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 NDC1Q9BTX1 674 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 REXO4Q9GZR2 422 aaKnown RBP5.23□□□□□ -1.57
SSR1-209ENST00000488834 LIMCH1Q9UPQ0 1083 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 SIK3Q9Y2K2 1263 aa5.23□□□□□ -1.57
SSR1-209ENST00000488834 KIAA0391O15091 583 aaKnown RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 TRIM24O15164 1050 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 MATN3O15232 486 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 PPM1GO15355 546 aaPredicted RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 POMCP01189 267 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 C1SP09871 688 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 ALAS1P13196 640 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 VCAM1P19320 739 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 PCSK1P29120 753 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 APOBEC3AP31941 199 aaPredicted RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 CDC42EP1Q00587 391 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 NHLH2Q02577 135 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 IL10RAQ13651 578 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 LSM12Q3MHD2 195 aaKnown RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 C1QL3Q5VWW1 255 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 NAIF1Q69YI7 327 aaPredicted RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 DRICH1Q6PGQ1 229 aaPredicted RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 CPA6Q8N4T0 437 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 KAT5Q92993 513 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 DCLRE1CQ96SD1 692 aaKnown RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 KCNH6Q9H252 994 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 TRPM5Q9NZQ8 1165 aa5.22□□□□□ -1.57
SSR1-209ENST00000488834 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.22□□□□□ -1.57
SSR1-209ENST00000488834 ATRNL1Q5VV63 1379 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 AMY1AP04745 511 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 SPATA31D3P0C874 917 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 PF4V1P10720 104 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 RNASE9P60153 205 aaKnown RBP5.21□□□□□ -1.58
SSR1-209ENST00000488834 DGCR2P98153 550 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 MTM1Q13496 603 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 TUBA3CQ13748 450 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 TOB2Q14106 344 aaPredicted RBP5.21□□□□□ -1.58
SSR1-209ENST00000488834 CCDC157Q569K6 752 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 TMEM240Q5SV17 173 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 TUBA3EQ6PEY2 450 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 SPATA31D4Q6ZUB0 917 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 USP51Q70EK9 711 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 HTR3DQ70Z44 454 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 MED25Q71SY5 747 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 GPRIN1Q7Z2K8 1008 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 UBE3BQ7Z3V4 1068 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 TTC7BQ86TV6 843 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 CMTR2Q8IYT2 770 aaKnown RBP5.21□□□□□ -1.58
SSR1-209ENST00000488834 SYNE4Q8N205 404 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 ZNF276Q8N554 614 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 ZGPATQ8N5A5 531 aaKnown RBP5.21□□□□□ -1.58
SSR1-209ENST00000488834 CLPTM1LQ96KA5 538 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 ZNF747Q9BV97 191 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 MAN1C1Q9NR34 630 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 CEP72Q9P209 647 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 SERPINB13Q9UIV8 391 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 ANKRD6Q9Y2G4 727 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 IPPQ9Y573 584 aa5.21□□□□□ -1.58
SSR1-209ENST00000488834 CFAP20Q9Y6A4 193 aaKnown RBP5.21□□□□□ -1.58
SSR1-209ENST00000488834 E2F8A0AVK6 867 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 LEFTY2O00292 366 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 PLSCR1O15162 318 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 SGTAO43765 313 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 RPS6KA4O75676 772 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 ITGB1P05556 798 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 C6P13671 934 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 ZSCAN20P17040 1043 aaPredicted RBP5.2□□□□□ -1.58
SSR1-209ENST00000488834 TNFRSF1AP19438 455 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 CHN2P52757 468 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 EPHB1P54762 984 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 MXRA7P84157 204 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 PIN1Q13526 163 aaPredicted RBP5.2□□□□□ -1.58
SSR1-209ENST00000488834 RAB39AQ14964 217 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 OTUD7BQ6GQQ9 843 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 GDF7Q7Z4P5 450 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 SLC25A43Q8WUT9 341 aaPredicted RBP5.2□□□□□ -1.58
SSR1-209ENST00000488834 ZNF503Q96F45 646 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 MYOCQ99972 504 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 C11orf54Q9H0W9 315 aaPredicted RBP5.2□□□□□ -1.58
SSR1-209ENST00000488834 ZNF703Q9H7S9 590 aaPredicted RBP5.2□□□□□ -1.58
SSR1-209ENST00000488834 ZNF180Q9UJW8 692 aa5.2□□□□□ -1.58
SSR1-209ENST00000488834 USP15Q9Y4E8 981 aaPredicted RBP5.2□□□□□ -1.58
SSR1-209ENST00000488834 TCRBV7S2A1N4TA0A589 114 aa5.19□□□□□ -1.58
SSR1-209ENST00000488834 DRGXA6NNA5 263 aa5.19□□□□□ -1.58
SSR1-209ENST00000488834 DIRC3C9JPN6 131 aa5.19□□□□□ -1.58
SSR1-209ENST00000488834 NPIPB8E9PQR5 432 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms