RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CLDN3O15551 220 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 MBTPS2O43462 519 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 NR1I2O75469 434 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 PPP1R37O75864 691 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 KCNE1P15382 129 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 ME1P48163 572 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 BMS1Q14692 1282 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 SLC10A6Q3KNW5 377 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 KIAA0319Q5VV43 1072 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 MAP4K3Q8IVH8 894 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 SMRP1Q8NCR6 262 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 SNX27Q96L92 541 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 HERC2P3Q9BVR0 1158 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 SEL1LQ9UBV2 794 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 ADAM28Q9UKQ2 775 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 FAM189A1O60320 539 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 GAP43P17677 238 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 LIG4P49917 911 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 YARSP54577 528 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 DSG1Q02413 1049 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 SMAD4Q13485 552 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 FUT10Q6P4F1 479 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 SYCE2Q6PIF2 218 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 CD300LGQ6UXG3 332 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 STAMQ92783 540 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 KLHL5Q96PQ7 755 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 S1PR5Q9H228 398 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 CUEDC2Q9H467 287 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 CD320Q9NPF0 282 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 TOPORSQ9NS56 1045 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 CNTN3Q9P232 1028 aa17.44■□□□□ 0.38
CTDSP1-209ENST00000488627 A0A0B4J269 797 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 ANKRD63C9JTQ0 380 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 TADA2AO75478 443 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 KIF4AO95239 1232 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 ABCD1P33897 745 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 SOX4Q06945 474 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 BECN1Q14457 450 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 SMAD2Q15796 467 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 ANKRD54Q6NXT1 300 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 LLGL2Q6P1M3 1020 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 CNNM4Q6P4Q7 775 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 GPR65Q8IYL9 337 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 DHX58Q96C10 678 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 BICD1Q96G01 975 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 TNMDQ9H2S6 317 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 RXFP1Q9HBX9 757 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 OLFML3Q9NRN5 406 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 MRPL17Q9NRX2 175 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 TBC1D7Q9P0N9 293 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 STYXL1Q9Y6J8 313 aa17.43■□□□□ 0.38
CTDSP1-209ENST00000488627 TTC26A0AVF1 554 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 TISP43B9A030 160 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 TNFRSF10AO00220 468 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 POLR2DO15514 142 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 ADRB2P07550 413 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 CLTAP09496 248 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 CASP5P51878 434 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 KCNA1Q09470 495 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 UPP1Q16831 310 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 HERC4Q5GLZ8 1057 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 ZBTB41Q5SVQ8 909 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 SUSD6Q92537 303 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 B3GALT6Q96L58 329 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 TRIM9Q9C026 710 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 MRPL44Q9H9J2 332 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 GOLGA2P5Q9HBQ8 144 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 PANK4Q9NVE7 773 aa17.42■□□□□ 0.38
CTDSP1-209ENST00000488627 TMEM189-UBE2V1I3L0A0 370 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 C2CD2LO14523 706 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 OGTO15294 1046 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 URODP06132 367 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 IDEP14735 1019 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 EPCAMP16422 314 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 CA8P35219 290 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 TNFSF9P41273 254 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 GLUD2P49448 558 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 CLCNKBP51801 687 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 KRT85P78386 507 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 ZBTB6Q15916 424 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 USP41Q3LFD5 358 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 DCLRE1AQ6PJP8 1040 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 HASPINQ8TF76 798 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 CASP10Q92851 521 aa17.41■□□□□ 0.38
CTDSP1-209ENST00000488627 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms