RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SPATA31C1P0DKV0 1188 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 ATP2B1P20020 1258 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 RAB33AQ14088 237 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.04■□□□□ 0.96
GGPS1-206ENST00000488594 NACC1Q96RE7 527 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 HINFPQ9BQA5 517 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 BCO2Q9BYV7 579 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 OSBPL6Q9BZF3 934 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 SNTG2Q9NY99 539 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 KCNH3Q9ULD8 1083 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 POLIQ9UNA4 740 aa21.04■□□□□ 0.96
GGPS1-206ENST00000488594 CACNA1AO00555 2505 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 POTEMA6NI47 508 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 BTBD18B2RXH4 712 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 CCL16O15467 120 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 DTNBO60941 627 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 NTHL1P78549 312 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 TRIM29Q14134 588 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 NAB2Q15742 525 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 MLF2Q15773 248 aaPredicted RBP21.03■□□□□ 0.96
GGPS1-206ENST00000488594 ZNF528Q3MIS6 628 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 RSPO2Q6UXX9 243 aaPredicted RBP21.03■□□□□ 0.96
GGPS1-206ENST00000488594 CATSPER3Q86XQ3 398 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 DIS3L2Q8IYB7 885 aaKnown RBP21.03■□□□□ 0.96
GGPS1-206ENST00000488594 KIAA2013Q8IYS2 634 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 ST13P5Q8NFI4 369 aaPredicted RBP21.03■□□□□ 0.96
GGPS1-206ENST00000488594 SLC7A14Q8TBB6 771 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 RMDN1Q96DB5 314 aa21.03■□□□□ 0.96
GGPS1-206ENST00000488594 DDX23Q9BUQ8 820 aaKnown RBP21.03■□□□□ 0.96
GGPS1-206ENST00000488594 A0A087WWV3 80 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 TMEM189-UBE2V1I3L0A0 370 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 ACKR2O00590 384 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 GLULP15104 373 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 MAGEA9P43362 315 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 RBM25P49756 843 aaKnown RBP21.02■□□□□ 0.96
GGPS1-206ENST00000488594 ANAPC15P60006 121 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 SNW1Q13573 536 aaKnown RBP21.02■□□□□ 0.96
GGPS1-206ENST00000488594 SLC44A4Q53GD3 710 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 AXDND1Q5T1B0 1012 aaPredicted RBP21.02■□□□□ 0.96
GGPS1-206ENST00000488594 FBXO4Q9UKT5 387 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 ZNF292O60281 2723 aa21.02■□□□□ 0.96
GGPS1-206ENST00000488594 ADAM12O43184 909 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 KINO60870 393 aaKnown RBP21.01■□□□□ 0.95
GGPS1-206ENST00000488594 PRKCBP05771 671 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 FGFR3P22607 806 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 NAMPTP43490 491 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 PPP2R5AQ15172 486 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 DCAF4L1Q3SXM0 396 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 DGLUCYQ7Z3D6 616 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 ERMNQ8TAM6 284 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 DEPTORQ8TB45 409 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 ITFG1Q8TB96 612 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 POLR3CQ9BUI4 534 aaPredicted RBP21.01■□□□□ 0.95
GGPS1-206ENST00000488594 CCDC113Q9H0I3 377 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 MTRRQ9UBK8 725 aa21.01■□□□□ 0.95
GGPS1-206ENST00000488594 TTLL13PA6NNM8 815 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 LAMTOR5O43504 91 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 B3GAT3O94766 335 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 CYP11B2P19099 503 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 OR1D2P34982 312 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 PUM1Q14671 1186 aaKnown RBP eCLIP21■□□□□ 0.95
GGPS1-206ENST00000488594 PABPC1LQ4VXU2 614 aaKnown RBP21■□□□□ 0.95
GGPS1-206ENST00000488594 PADI6Q6TGC4 694 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 APBB1IPQ7Z5R6 666 aaPredicted RBP21■□□□□ 0.95
GGPS1-206ENST00000488594 NOSTRINQ8IVI9 506 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 MAML2Q8IZL2 1156 aaPredicted RBP21■□□□□ 0.95
GGPS1-206ENST00000488594 GTF3C6Q969F1 213 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 UROC1Q96N76 676 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 SPATA6Q9NWH7 488 aaPredicted RBP21■□□□□ 0.95
GGPS1-206ENST00000488594 BACE2Q9Y5Z0 518 aa21■□□□□ 0.95
GGPS1-206ENST00000488594 WNT7AO00755 349 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 TRAPPC3O43617 180 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 MED24O75448 989 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 EFNA5P52803 228 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 UBXN2BQ14CS0 331 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 ANKS3Q6ZW76 656 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 NPAS3Q8IXF0 933 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 NECAB1Q8N987 351 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 SUMF1Q8NBK3 374 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 BSNDQ8WZ55 320 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 NELL2Q99435 816 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 TMEM60Q9H2L4 133 aa20.99■□□□□ 0.95
GGPS1-206ENST00000488594 ARHGEF35A5YM69 484 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 FAM170BA6NMN3 283 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 SPTLC1O15269 473 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 LRRN2O75325 713 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 RPA1P27694 616 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 MCM7P33993 719 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 ME3Q16798 604 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 ZBTB41Q5SVQ8 909 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 NSUN7Q8NE18 718 aaKnown RBP20.98■□□□□ 0.95
GGPS1-206ENST00000488594 KXD1Q9BQD3 176 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 CXCL16Q9H2A7 254 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 GDE1Q9NZC3 331 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 DNMT3BQ9UBC3 853 aaKnown RBP20.98■□□□□ 0.95
GGPS1-206ENST00000488594 GDAQ9Y2T3 454 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 MRPS23Q9Y3D9 190 aaKnown RBP20.98■□□□□ 0.95
GGPS1-206ENST00000488594 CDY1Q9Y6F8 540 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 OTOGLQ3ZCN5 2332 aa20.98■□□□□ 0.95
GGPS1-206ENST00000488594 ECI2O75521 394 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms