RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-210ENST00000488228 TMEM130Q8N3G9 435 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
UBE4B-210ENST00000488228 COLGALT1Q8NBJ5 622 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 FAM84AQ96KN4 292 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
UBE4B-210ENST00000488228 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 NRDE2Q9H7Z3 1164 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 TOPORSQ9NS56 1045 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-210ENST00000488228 HSPBP1Q9NZL4 362 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 CPSF3Q9UKF6 684 aaKnown RBP12.04□□□□□ -0.48
UBE4B-210ENST00000488228 F8W810 466 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 RFXAPO00287 272 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 ADRB2P07550 413 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
UBE4B-210ENST00000488228 PRCPP42785 496 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 SLC11A1P49279 550 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 WNT7BP56706 349 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 DSC1Q08554 894 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 MORC3Q14149 939 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 NAB2Q15742 525 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 SLC10A6Q3KNW5 377 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 CRELD2Q6UXH1 353 aaPredicted RBP12.03□□□□□ -0.48
UBE4B-210ENST00000488228 CBWD2Q8IUF1 395 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 GPD1LQ8N335 351 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 DEFB123Q8N688 67 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 BCL7CQ8WUZ0 217 aaPredicted RBP12.03□□□□□ -0.48
UBE4B-210ENST00000488228 RABGGTAQ92696 567 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 PPP1R10Q96QC0 940 aaKnown RBP12.03□□□□□ -0.48
UBE4B-210ENST00000488228 RPF1Q9H9Y2 349 aaKnown RBP12.03□□□□□ -0.48
UBE4B-210ENST00000488228 GOLGA2P5Q9HBQ8 144 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 CNTN3Q9P232 1028 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 TUBGCP4Q9UGJ1 667 aa12.03□□□□□ -0.48
UBE4B-210ENST00000488228 PRG3Q9Y2Y8 225 aaPredicted RBP12.03□□□□□ -0.48
UBE4B-210ENST00000488228 SMIM28A0A1B0GU29 152 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 TTC26A0AVF1 554 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 TRIM49BA6NDI0 452 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 CASTOR2A6NHX0 329 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 LACTBL1A8MY62 500 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 TULP1O00294 542 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-210ENST00000488228 EXTL3O43909 919 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 NR3C1P04150 777 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 NFICP08651 508 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 BMPR1AP36894 532 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 GUCY2FP51841 1108 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 BCAR1P56945 870 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 SOX4Q06945 474 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-210ENST00000488228 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 KCNT2Q6UVM3 1135 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 BRSK2Q8IWQ3 736 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 KLHL23Q8NBE8 558 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 RSPH1Q8WYR4 309 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 C18orf25Q96B23 403 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-210ENST00000488228 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 SAMD11Q96NU1 681 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 FAM193BQ96PV7 902 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-210ENST00000488228 PAAF1Q9BRP4 392 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 RBAKQ9NYW8 714 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-210ENST00000488228 KANSL3Q9P2N6 904 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 CTNND2Q9UQB3 1225 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 RWDD3Q9Y3V2 267 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 REV3LO60673 3130 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 PLXNA3P51805 1871 aa12.02□□□□□ -0.49
UBE4B-210ENST00000488228 PDXKO00764 312 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 KIF20AO95235 890 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 ITGB1P05556 798 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 THP07101 528 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 KCNE1P15382 129 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 OR1G1P47890 313 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 PMS1P54277 932 aaKnown RBP12.01□□□□□ -0.49
UBE4B-210ENST00000488228 TUSC3Q13454 348 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 SNRNP35Q16560 246 aaKnown RBP12.01□□□□□ -0.49
UBE4B-210ENST00000488228 KYAT1Q16773 422 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 XKR4Q5GH76 650 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 JADE1Q6IE81 842 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 KLHL10Q6JEL2 608 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 GPR153Q6NV75 609 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 C12orf56Q8IXR9 622 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 COLGALT2Q8IYK4 626 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 ADSSL1Q8N142 457 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 SLC39A11Q8N1S5 342 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 XXYLT1Q8NBI6 393 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 GOLGA5Q8TBA6 731 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 C11orf84Q9BUA3 381 aaPredicted RBP12.01□□□□□ -0.49
UBE4B-210ENST00000488228 ALG13Q9NP73 1137 aaKnown RBP12.01□□□□□ -0.49
UBE4B-210ENST00000488228 AAASQ9NRG9 546 aa12.01□□□□□ -0.49
UBE4B-210ENST00000488228 MARCH5Q9NX47 278 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms