RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RB1P06400 928 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 CXCL8P10145 99 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 PRCPP42785 496 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 AFF1P51825 1210 aaKnown RBP17.12■□□□□ 0.33
C9orf3-219ENST00000488186 GRIN2CQ14957 1233 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 CD302Q8IX05 232 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 GPD1LQ8N335 351 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 TRIML1Q8N9V2 468 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 SYAP1Q96A49 352 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-219ENST00000488186 FAM161BQ96MY7 647 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 ZNF558Q96NG5 402 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-219ENST00000488186 CWH43Q9H720 699 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 NRDE2Q9H7Z3 1164 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 LMCD1Q9NZU5 365 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 CPSF3Q9UKF6 684 aaKnown RBP17.12■□□□□ 0.33
C9orf3-219ENST00000488186 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
C9orf3-219ENST00000488186 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 C5orf67F2Z3F1 127 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 PSMA7O14818 248 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 INPPL1O15357 1258 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 EXOC3O60645 756 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 ARHGEF15O94989 841 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 RPL13P26373 211 aaKnown RBP17.11■□□□□ 0.33
C9orf3-219ENST00000488186 OR1G1P47890 313 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 BCAR1P56945 870 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 MORC3Q14149 939 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 KCNT2Q6UVM3 1135 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 ZNF280BQ86YH2 543 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 XXYLT1Q8NBI6 393 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 COLGALT1Q8NBJ5 622 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 RDH13Q8NBN7 331 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 SNX27Q96L92 541 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
C9orf3-219ENST00000488186 RBAKQ9NYW8 714 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-219ENST00000488186 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 XPOTO43592 962 aaKnown RBP17.1■□□□□ 0.33
C9orf3-219ENST00000488186 DDHD2O94830 711 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 IL18RAPO95256 599 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 PPM1AP35813 382 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
C9orf3-219ENST00000488186 KRT17Q04695 432 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 TUSC3Q13454 348 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 ENOX2Q16206 610 aaKnown RBP17.1■□□□□ 0.33
C9orf3-219ENST00000488186 COBLL1Q53SF7 1204 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 CCDC183Q5T5S1 534 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 ALKAL1Q6UXT8 129 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-219ENST00000488186 TMEM175Q9BSA9 504 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 C11orf84Q9BUA3 381 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-219ENST00000488186 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 CNTN3Q9P232 1028 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 HCSTQ9UBK5 93 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 PUF60Q9UHX1 559 aaKnown RBP17.1■□□□□ 0.33
C9orf3-219ENST00000488186 FRMD4BQ9Y2L6 1034 aa17.1■□□□□ 0.33
C9orf3-219ENST00000488186 PTGESO14684 152 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 FAM189A1O60320 539 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 NR3C1P04150 777 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 GALTP07902 379 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 KCNE1P15382 129 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 GPM6BQ13491 265 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 SURF1Q15526 300 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 CEP135Q66GS9 1140 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 GSTCDQ8NEC7 633 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 TSPAN18Q96SJ8 248 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 COLEC11Q9BWP8 271 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 ASB7Q9H672 318 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 DNAJB4Q9UDY4 337 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 TRAF3IP3Q9Y228 551 aa17.09■□□□□ 0.33
C9orf3-219ENST00000488186 TTC26A0AVF1 554 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 BICDL2A1A5D9 508 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 CASTOR2A6NHX0 329 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 NT5C1B-RDH14C9J2C7 533 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 NRP1O14786 923 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 PBX3P40426 434 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 SLC11A1P49279 550 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 SPAG1Q07617 926 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 ADAM9Q13443 819 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 MYBPC2Q14324 1141 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 TMEM132DQ14C87 1099 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 SKOR2Q2VWA4 1001 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 XKR4Q5GH76 650 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 SASS6Q6UVJ0 657 aa17.08■□□□□ 0.32
C9orf3-219ENST00000488186 CRELD2Q6UXH1 353 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-219ENST00000488186 SPRED2Q7Z698 418 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms