RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 LAMTOR5O43504 91 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 DTNBO60941 627 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 TADA2AO75478 443 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 TDGF1P13385 188 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 ATXN1P54253 815 aaKnown RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 CSTF1Q05048 431 aaKnown RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 TFDP1Q14186 410 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 UBXN2BQ14CS0 331 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 PPM1LQ5SGD2 360 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 RSPO2Q6UXX9 243 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 MTSS1LQ765P7 747 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 SLC7A14Q8TBB6 771 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
MCF2L-228ENST00000487354 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 SMG5Q9UPR3 1016 aaKnown RBP17.04■□□□□ 0.32
MCF2L-228ENST00000487354 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 EDN1P05305 212 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 LIN9Q5TKA1 542 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 TSSK4Q6SA08 328 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 CD300LGQ6UXG3 332 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 TPH2Q8IWU9 490 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 ZNF274Q96GC6 653 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-228ENST00000487354 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
MCF2L-228ENST00000487354 POLR3FQ9H1D9 316 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-228ENST00000487354 PARD6AQ9NPB6 346 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 NCDNQ9UBB6 729 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 PARP2Q9UGN5 583 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 CFAP47Q6ZTR5 3102 aa17.03■□□□□ 0.32
MCF2L-228ENST00000487354 WNT7AO00755 349 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 NRG2O14511 850 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-228ENST00000487354 DGAT1O75907 488 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 PSMA5P28066 241 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 RARRES1P49788 294 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 STK3Q13188 491 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 CDCA2Q69YH5 1023 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-228ENST00000487354 TPRG1Q6ZUI0 275 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 HACE1Q8IYU2 909 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 ING5Q8WYH8 240 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 TNFRSF25Q93038 417 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 BORCS6Q96GS4 357 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 PDZD7Q9H5P4 517 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 GPRC5CQ9NQ84 441 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 ANKEF1Q9NU02 776 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
MCF2L-228ENST00000487354 A0A087WWV3 80 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 FGFR3P22607 806 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 FCARP24071 287 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 MAGEA9P43362 315 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 RPS9P46781 194 aaKnown RBP17.01■□□□□ 0.31
MCF2L-228ENST00000487354 RAB33AQ14088 237 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 AXDND1Q5T1B0 1012 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-228ENST00000487354 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 FZD8Q9H461 694 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 MTRRQ9UBK8 725 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 KCNH3Q9ULD8 1083 aa17.01■□□□□ 0.31
MCF2L-228ENST00000487354 STK36Q9NRP7 1315 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 CPLX1O14810 134 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 XYLBO75191 536 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 ECI2O75521 394 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 RECQL4O94761 1208 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 PFKPQ01813 784 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
MCF2L-228ENST00000487354 SCRN1Q12765 414 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 FAM187BQ17R55 369 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 PABPC1LQ4VXU2 614 aaKnown RBP17■□□□□ 0.31
MCF2L-228ENST00000487354 BSNDQ8WZ55 320 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 SNTG2Q9NY99 539 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 POLIQ9UNA4 740 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 USP20Q9Y2K6 914 aa17■□□□□ 0.31
MCF2L-228ENST00000487354 RALGAPA1Q6GYQ0 2036 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 CEBPBP17676 345 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 OR1D2P34982 312 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 MTAPQ13126 283 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 NR5A1Q13285 461 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 UVSSAQ2YD98 709 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 ZBTB41Q5SVQ8 909 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-228ENST00000487354 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-228ENST00000487354 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 C3orf58Q8NDZ4 430 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 PIGOQ8TEQ8 1089 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 ATRIPQ8WXE1 791 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 PRIMPOLQ96LW4 560 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 HEBP1Q9NRV9 189 aa16.99■□□□□ 0.31
MCF2L-228ENST00000487354 TMEM189-UBE2V1I3L0A0 370 aa16.98■□□□□ 0.31
MCF2L-228ENST00000487354 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
MCF2L-228ENST00000487354 CTDNEP1O95476 244 aa16.98■□□□□ 0.31
MCF2L-228ENST00000487354 THP07101 528 aa16.98■□□□□ 0.31
MCF2L-228ENST00000487354 RHOP08100 348 aa16.98■□□□□ 0.31
MCF2L-228ENST00000487354 LMNB2Q03252 620 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms