RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 ADAM33Q9BZ11 813 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 WNT8AQ9H1J5 351 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 HEY2Q9UBP5 337 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 TRAF3IP3Q9Y228 551 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 MROH7Q68CQ1 1323 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 ADGRA3Q8IWK6 1321 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 IGSF9BQ9UPX0 1349 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 AKAP11Q9UKA4 1901 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POTEFA5A3E0 1075 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 EDF1O60869 148 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 ZNF189O75820 626 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 FTLP02792 175 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POTEIP0CG38 1075 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 BCRP11274 1271 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 VAV1P15498 845 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 CDK7P50613 346 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 FXR2P51116 673 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 PPP2R5CQ13362 524 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 MPP2Q14168 576 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 ZC2HC1CQ53FD0 456 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POTEEQ6S8J3 1075 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 SFR1Q86XK3 245 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 SCFD1Q8WVM8 642 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 PPP2R3CQ969Q6 453 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 SLC7A6OSQ96CW6 309 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 PIGSQ96S52 555 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 NUDT12Q9BQG2 462 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 TRAIPQ9BWF2 469 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 CADM1Q9BY67 442 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 IQCGQ9H095 443 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 ZNF287Q9HBT7 754 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 DCP1AQ9NPI6 582 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 PICK1Q9NRD5 415 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 ETNK2Q9NVF9 386 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 STX18Q9P2W9 335 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 CHORDC1Q9UHD1 332 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 ASAP1Q9ULH1 1129 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 NIP7Q9Y221 180 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 PKD1L3Q7Z443 1732 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POTEB3A0JP26 581 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POTECB2RU33 542 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 SLC37A4O43826 429 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 TBX10O75333 385 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 PENKP01210 267 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 GPC5P78333 572 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 MYL7Q01449 175 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 CHRNDQ07001 517 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 CYLC2Q14093 348 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 KNOP1Q1ED39 458 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 FOXB2Q5VYV0 432 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 IZUMO3Q5VZ72 239 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 KLC3Q6P597 504 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 LVRNQ6Q4G3 990 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 POTEBQ6S5H4 581 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 NSMFQ6X4W1 530 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 MAML1Q92585 1016 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 FAM136AQ96C01 138 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 DYNLL2Q96FJ2 89 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 TUBGCP5Q96RT8 1024 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 RIOK1Q9BRS2 568 aaKnown RBP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 CCDC28BQ9BUN5 200 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 FGFBP2Q9BYJ0 223 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 BLOC1S6Q9UL45 172 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 JAG2Q9Y219 1238 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 FRMD4BQ9Y2L6 1034 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS13D-209ENST00000487188 UMODL1Q5DID0 1318 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 KAT6BQ8WYB5 2073 aa6.63□□□□□ -1.35
VPS13D-209ENST00000487188 GLI3P10071 1580 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 ERVV-2B6SEH9 535 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 SUPT3HO75486 399 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 FAM13AO94988 1023 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 USP17L8P0C7I0 530 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 PIK3CAP42336 1068 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 CYP2J2P51589 502 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 NEK3P51956 506 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 HP1BP3Q5SSJ5 553 aaPredicted RBP6.62□□□□□ -1.35
VPS13D-209ENST00000487188 FOXR2Q6PJQ5 311 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 RGS9BPQ6ZS82 235 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 CYP4X1Q8N118 509 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 CABLES1Q8TDN4 633 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 NAT14Q8WUY8 206 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 MXD3Q9BW11 206 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 OCEL1Q9H607 264 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 RMI1Q9H9A7 625 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 ALG13Q9NP73 1137 aaKnown RBP6.62□□□□□ -1.35
VPS13D-209ENST00000487188 CLIC5Q9NZA1 410 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 SENP1Q9P0U3 644 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 CCDC88AQ3V6T2 1871 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 H3BRJ5 948 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 ATMINO43313 823 aaPredicted RBP6.62□□□□□ -1.35
VPS13D-209ENST00000487188 ECE2O60344 883 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 ITGA2BP08514 1039 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 PYGMP11217 842 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 PABPC4Q13310 644 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS13D-209ENST00000487188 EPHA7Q15375 998 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
VPS13D-209ENST00000487188 SLC44A4Q53GD3 710 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms