RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CASKIN2Q8WXE0 1202 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 LRTOMTQ8WZ04 291 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 CFHR4Q92496 578 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 RABGGTAQ92696 567 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 STRBPQ96SI9 672 aaKnown RBP6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 PTPN18Q99952 460 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 ENKD1Q9H0I2 346 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 ATP6V0A4Q9HBG4 840 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 RUVBL1Q9Y265 456 aaKnown RBP6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 RIPOR2Q9Y4F9 1068 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 COMMD10Q9Y6G5 202 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 SLC4A7Q9Y6M7 1214 aa6.21□□□□□ -1.42
PRPF38A-203ENST00000487160 NUAK1O60285 661 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 B4GALT3O60512 393 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 IL2RBP14784 551 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 ALOX15P16050 662 aaPredicted RBP6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 SMARCA1P28370 1054 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 KIAA2012Q0VF49 1180 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 SP140Q13342 867 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 SAFB2Q14151 953 aaKnown RBP eCLIP6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 FLYWCH1Q4VC44 716 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 MFSD14BQ5SR56 506 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 APOA5Q6Q788 366 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 PDZD4Q76G19 769 aaPredicted RBP6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 ADGRE4PQ86SQ3 457 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 FAM124AQ86V42 546 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 POU5F2Q8N7G0 328 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 C22orf23Q9BZE7 217 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 ZMAT3Q9HA38 289 aaKnown RBP6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 PUF60Q9UHX1 559 aaKnown RBP6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 PCDHA1Q9Y5I3 950 aa6.2□□□□□ -1.42
PRPF38A-203ENST00000487160 ATRNL1Q5VV63 1379 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 SMARCA2P51531 1590 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 MATN2O00339 956 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 GZMKP49863 264 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 NPEPPSP55786 919 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 FAM47AQ5JRC9 791 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 TCERG1LQ5VWI1 586 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 AFMIDQ63HM1 303 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 MORC1Q86VD1 984 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 MORC4Q8TE76 937 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 MTFMTQ96DP5 389 aaKnown RBP6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 CEP95Q96GE4 821 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 FAM167AQ96KS9 214 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 TBCBQ99426 244 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 ELAC2Q9BQ52 826 aaKnown RBP6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 IL23AQ9NPF7 189 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 KLHL11Q9NVR0 708 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 RTEL1Q9NZ71 1219 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 MOCS1Q9NZB8 636 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 FEZ2Q9UHY8 353 aaPredicted RBP6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 CPA4Q9UI42 421 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 PCDHA6Q9UN73 950 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 NCAPD3P42695 1498 aa6.19□□□□□ -1.42
PRPF38A-203ENST00000487160 UBE2QL1A1L167 161 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 NT5C1B-RDH14C9J2C7 533 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 F2RL2O00254 374 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 SLC26A4O43511 780 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 NOBOXO60393 691 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 MGEA5O60502 916 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 RAP2AP10114 183 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 MYF5P13349 255 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 SERPINB3P29508 390 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 ALDH1A3P47895 512 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 KCNC1P48547 511 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 GJA9P57773 515 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 RIN1Q13671 783 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 POLD3Q15054 466 aaPredicted RBP6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 ZNF124Q15973 351 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 CIAPIN1Q6FI81 312 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 DCBLD1Q8N8Z6 715 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 IL17RAQ96F46 866 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 MYOCQ99972 504 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 NUP62CLQ9H1M0 184 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 KCNH6Q9H252 994 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 C12orf65Q9H3J6 166 aaKnown RBP6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 WDCPQ9H6R7 721 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 AGO3Q9H9G7 860 aaKnown RBP6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 TPCN1Q9ULQ1 816 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 HMGXB3Q12766 1538 aa6.18□□□□□ -1.42
PRPF38A-203ENST00000487160 A0A1W2PPL8 197 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 PLEKHD1A6NEE1 506 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 STC2O76061 302 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 CNOT4O95628 575 aaKnown RBP6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 KITP10721 976 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 PRDX5P30044 214 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 FLT3LGP49771 235 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 AK2P54819 239 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 RAC3P60763 192 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 MRPL49Q13405 166 aaKnown RBP6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 PKN1Q16512 942 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 LONRF1Q17RB8 773 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 NT5DC1Q5TFE4 455 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 PPP1R3BQ86XI6 285 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 KRT78Q8N1N4 520 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 CELF5Q8N6W0 485 aaKnown RBP6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 SHCBP1Q8NEM2 672 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 IL31RAQ8NI17 732 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 APIPQ96GX9 242 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms