RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SPRED2Q7Z698 418 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 COLGALT2Q8IYK4 626 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 CEP120Q8N960 986 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 GSTCDQ8NEC7 633 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 ZNF507Q8TCN5 953 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 POF1BQ8WVV4 589 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
LIMS3-205ENST00000487150 IGSF21Q96ID5 467 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 ZBTB45Q96K62 511 aaPredicted RBP15.95■□□□□ 0.14
LIMS3-205ENST00000487150 GSDMAQ96QA5 445 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 SSX2IPQ9Y2D8 614 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 DERAQ9Y315 318 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 PTGESO14684 152 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 GRM6O15303 877 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 PRPF6O94906 941 aaKnown RBP15.94■□□□□ 0.14
LIMS3-205ENST00000487150 IL18RAPO95256 599 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SLC34A2O95436 690 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 KNOP1Q1ED39 458 aaKnown RBP15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SLC39A4Q6P5W5 647 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 ALKAL1Q6UXT8 129 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 DDX53Q86TM3 631 aaKnown RBP15.94■□□□□ 0.14
LIMS3-205ENST00000487150 NT5DC4Q86YG4 428 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 ZNF280BQ86YH2 543 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SPPL3Q8TCT6 385 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 ASB7Q9H672 318 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 ALG13Q9NP73 1137 aaKnown RBP15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SLC39A2Q9NP94 309 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 HCSTQ9UBK5 93 aa15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SF3B1O75533 1304 aaKnown RBP eCLIP15.94■□□□□ 0.14
LIMS3-205ENST00000487150 SMIM28A0A1B0GU29 152 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 TMEM189-UBE2V1I3L0A0 370 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 RFXAPO00287 272 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 NRP1O14786 923 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 KLRC4O43908 158 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 EXTL3O43909 919 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 FAM189A1O60320 539 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 DDHD2O94830 711 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 CXCL8P10145 99 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 PAX3P23760 479 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 CASP1P29466 404 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 RPL9P32969 192 aaKnown RBP15.93■□□□□ 0.14
LIMS3-205ENST00000487150 PPP1R2P41236 205 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 SMC1AQ14683 1233 aaKnown RBP15.93■□□□□ 0.14
LIMS3-205ENST00000487150 MICALL1Q8N3F8 863 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 SCFD1Q8WVM8 642 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 PPP1R10Q96QC0 940 aaKnown RBP15.93■□□□□ 0.14
LIMS3-205ENST00000487150 CDCA3Q99618 268 aaPredicted RBP15.93■□□□□ 0.14
LIMS3-205ENST00000487150 ENTPD7Q9NQZ7 604 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 DNAJB4Q9UDY4 337 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 CPSF3Q9UKF6 684 aaKnown RBP15.93■□□□□ 0.14
LIMS3-205ENST00000487150 UBQLN1Q9UMX0 589 aaKnown RBP15.93■□□□□ 0.14
LIMS3-205ENST00000487150 C2CD2Q9Y426 696 aa15.93■□□□□ 0.14
LIMS3-205ENST00000487150 CHD9Q3L8U1 2897 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 TTC26A0AVF1 554 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 ANKRD63C9JTQ0 380 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 TRAPPC3O43617 180 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 SRGAP2BP0DMP2 458 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 CYP3A5P20815 502 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 PBX3P40426 434 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 AFF1P51825 1210 aaKnown RBP15.92■□□□□ 0.14
LIMS3-205ENST00000487150 CREMQ03060 361 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 KCNA1Q09470 495 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 SURF1Q15526 300 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 ENOX2Q16206 610 aaKnown RBP15.92■□□□□ 0.14
LIMS3-205ENST00000487150 SLC10A6Q3KNW5 377 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 GLRA4Q5JXX5 417 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 C12orf56Q8IXR9 622 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 GPR65Q8IYL9 337 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 GPD1LQ8N335 351 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 BEST2Q8NFU1 509 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 HPS3Q969F9 1004 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 FGFBP2Q9BYJ0 223 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 AGPAT3Q9NRZ7 376 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 ADAM28Q9UKQ2 775 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 PRG3Q9Y2Y8 225 aaPredicted RBP15.92■□□□□ 0.14
LIMS3-205ENST00000487150 CHD7Q9P2D1 2997 aa15.92■□□□□ 0.14
LIMS3-205ENST00000487150 MYH11P35749 1972 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 FNDC1Q4ZHG4 1894 aaPredicted RBP15.91■□□□□ 0.14
LIMS3-205ENST00000487150 CASTOR2A6NHX0 329 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 PRPF40AO75400 957 aaKnown RBP15.91■□□□□ 0.14
LIMS3-205ENST00000487150 TADA2AO75478 443 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 URODP06132 367 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 ADRB2P07550 413 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 ADSSP30520 456 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 STIM1Q13586 685 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 PDXDC1Q6P996 788 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 NELFCDQ8IXH7 590 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 VPS52Q8N1B4 723 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 GUF1Q8N442 669 aaKnown RBP15.91■□□□□ 0.14
LIMS3-205ENST00000487150 KIAA0895Q8NCT3 520 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 KIF12Q96FN5 646 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 FAM213AQ9BRX8 229 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 HAPLN2Q9GZV7 340 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 MIOSQ9NXC5 875 aa15.91■□□□□ 0.14
LIMS3-205ENST00000487150 RBAKQ9NYW8 714 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms