RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 MPZL3Q6UWV2 235 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 GPR149Q86SP6 731 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 GPBP1Q86WP2 473 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 RASSF8Q8NHQ8 419 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 RIN2Q8WYP3 895 aaPredicted RBP20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 RAD54LQ92698 747 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 EDAQ92838 391 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 SNX21Q969T3 373 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 SRPRBQ9Y5M8 271 aaKnown RBP20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 SPDYE4A6NLX3 237 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 GLUD1P00367 558 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 MARCKSP29966 332 aaPredicted RBP20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 DDIT3P35638 169 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 NCKAP1LP55160 1127 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 OSTNP61366 133 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 CREMQ03060 361 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 ELAVL2Q12926 359 aaKnown RBP20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 MCM6Q14566 821 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 GLRA4Q5JXX5 417 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 DCLRE1AQ6PJP8 1040 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 ZPBP2Q6X784 338 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 HASPINQ8TF76 798 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 KCNN1Q92952 543 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 EPSTI1Q96J88 318 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 ZBTB45Q96K62 511 aaPredicted RBP20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 ACAP3Q96P50 834 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 REEP2Q9BRK0 252 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 TTPALQ9BTX7 342 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 ZSCAN16Q9H4T2 348 aaPredicted RBP20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 RAPGEFL1Q9UHV5 662 aa20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 FBXO2Q9UK22 296 aaPredicted RBP20.17■□□□□ 0.82
PRPF40A-209ENST00000486100 STX6O43752 255 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 SCP2P22307 547 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 RTP2Q5QGT7 225 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 FAM171A1Q5VUB5 890 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 ELMSAN1Q6PJG2 1045 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 C15orf39Q6ZRI6 1047 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 HAUS6Q7Z4H7 955 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 PALB2Q86YC2 1186 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 CMASQ8NFW8 434 aaPredicted RBP20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 HDAC7Q8WUI4 952 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 UROC1Q96N76 676 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 MAN1C1Q9NR34 630 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 TSHZ2Q9NRE2 1034 aa20.16■□□□□ 0.82
PRPF40A-209ENST00000486100 TMEM189-UBE2V1I3L0A0 370 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 B3GAT3O94766 335 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 FAM13AO94988 1023 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 SP100P23497 879 aaPredicted RBP20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 CLCNKBP51801 687 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 ZNF131P52739 623 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 ZXDAP98168 799 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 CEBPZQ03701 1054 aaKnown RBP20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 SPECC1Q5M775 1068 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 LILRA6Q6PI73 481 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 USP49Q70CQ1 688 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 CEP57Q86XR8 500 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 LNX1Q8TBB1 728 aaPredicted RBP20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 FEZF2Q8TBJ5 459 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 LARP4BQ92615 738 aaKnown RBP20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 PLEKHA4Q9H4M7 779 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 PARVGQ9HBI0 331 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 SLC38A7Q9NVC3 462 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 CCDC39Q9UFE4 941 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 USTQ9Y2C2 406 aa20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 MORC2Q9Y6X9 1032 aaPredicted RBP20.15■□□□□ 0.82
PRPF40A-209ENST00000486100 C2CD4DB7Z1M9 353 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 CLDN3O15551 220 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 TGM5O43548 720 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 KRT18P05783 430 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 HARSP12081 509 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 KCNE1P15382 129 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 RPL17P18621 184 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 MCL1Q07820 350 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 NOLC1Q14978 699 aaKnown RBP eCLIP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 SLC39A14Q15043 492 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 UPP1Q16831 310 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 PRSS55Q6UWB4 352 aaPredicted RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 CD300LGQ6UXG3 332 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 CYP26C1Q6V0L0 522 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 PIK3R5Q8WYR1 880 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 DDX27Q96GQ7 796 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 SNX27Q96L92 541 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 ZMAT2Q96NC0 199 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 CLIC6Q96NY7 704 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 USP28Q96RU2 1077 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 RHOBTB2Q9BYZ6 727 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 ANKFY1Q9P2R3 1169 aa20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 TDRD15B5MCY1 1934 aaKnown RBP20.14■□□□□ 0.81
PRPF40A-209ENST00000486100 CCDC195A0A1B0GUA6 201 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 TRAK2O60296 914 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 SPATA31D3P0C874 917 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 IGFBP6P24592 240 aaPredicted RBP20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 SOX4Q06945 474 aaPredicted RBP20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 PDXDC1Q6P996 788 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 TRIM67Q6ZTA4 783 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 SPATA31D4Q6ZUB0 917 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms