RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 WNT16Q9UBV4 365 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 DNM3Q9UQ16 869 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 K7ERI5 159 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 RPL17P18621 184 aaKnown RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 FGFR3P22607 806 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 NBR1Q14596 966 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PSMD5Q16401 504 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 FAM171A1Q5VUB5 890 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 CWF19L1Q69YN2 538 aaKnown RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 MFSD1Q9H3U5 465 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 PTPRHQ9HD43 1115 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 CACNG4Q9UBN1 327 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 RBM19Q9Y4C8 960 aaKnown RBP12.61□□□□□ -0.39
SCFD1-206ENST00000484733 TRIOO75962 3097 aa12.61□□□□□ -0.39
SCFD1-206ENST00000484733 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 GRM5P41594 1212 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 ALKAL1Q6UXT8 129 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 ACO2Q99798 780 aaKnown RBP12.6□□□□□ -0.39
SCFD1-206ENST00000484733 RTP3Q9BQQ7 232 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 KIFC3Q9BVG8 833 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 ARHGAP28Q9P2N2 729 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 USP20Q9Y2K6 914 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 ST18O60284 1047 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 LIG1P18858 919 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 AOC1P19801 751 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 NPTX2P47972 431 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 RAB33AQ14088 237 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 IL17AQ16552 155 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 UVSSAQ2YD98 709 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 HYIQ5T013 277 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 CD300LGQ6UXG3 332 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 DAW1Q8N136 415 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 SLC44A3Q8N4M1 653 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 DRC1Q96MC2 740 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 NTPCRQ9BSD7 190 aaKnown RBP12.6□□□□□ -0.39
SCFD1-206ENST00000484733 GDAQ9Y2T3 454 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 BACE2Q9Y5Z0 518 aa12.6□□□□□ -0.39
SCFD1-206ENST00000484733 PIEZO1Q92508 2521 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 VWA8A3KMH1 1905 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 E9PMD0 336 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 HIP1RO75146 1068 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 LAMP2P13473 410 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 PROZP22891 400 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 RABEP1Q15276 862 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 RINT1Q6NUQ1 792 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 DTHD1Q6ZMT9 781 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 HASPINQ8TF76 798 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
SCFD1-206ENST00000484733 MMTAG2Q9BU76 263 aaKnown RBP12.59□□□□□ -0.39
SCFD1-206ENST00000484733 MRPL4Q9BYD3 311 aaKnown RBP12.59□□□□□ -0.39
SCFD1-206ENST00000484733 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 DOCK8Q8NF50 2099 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 H0Y858 1186 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 MCF2P10911 925 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 SRFP11831 508 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 FSHRP23945 695 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 GUCY2CP25092 1073 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 NBL1P41271 181 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 PEX3P56589 373 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 MAPK7Q13164 816 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 UPP1Q16831 310 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 RILPL1Q5EBL4 403 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 TAS1R3Q7RTX0 852 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 CEP57Q86XR8 500 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 CCDC94Q9BW85 323 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-206ENST00000484733 CDT1Q9H211 546 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 POLD4Q9HCU8 107 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
SCFD1-206ENST00000484733 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 CCDC169A6NNP5 214 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 SLC26A4O43511 780 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 TRAPPC3O43617 180 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 NARSO43776 548 aaKnown RBP12.58□□□□□ -0.4
SCFD1-206ENST00000484733 MYBP10242 640 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
SCFD1-206ENST00000484733 DMP1Q13316 513 aaPredicted RBP12.58□□□□□ -0.4
SCFD1-206ENST00000484733 HTR4Q13639 388 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 PPM1LQ5SGD2 360 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 CCDC105Q8IYK2 499 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 SPIRE2Q8WWL2 714 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 KCNN1Q92952 543 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 KMT5AQ9NQR1 393 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 TOPORSQ9NS56 1045 aaPredicted RBP12.58□□□□□ -0.4
SCFD1-206ENST00000484733 SLC38A7Q9NVC3 462 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 FAM86C1Q9NVL1 165 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 ZDBF2Q9HCK1 2354 aa12.58□□□□□ -0.4
SCFD1-206ENST00000484733 ABLIM1O14639 778 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms