RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TRMT1LQ7Z2T5 733 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 SRGAP1Q7Z6B7 1085 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 DIS3L2Q8IYB7 885 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 LRRC43Q8N309 656 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 FAM184AQ8NB25 1140 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 NSUN7Q8NE18 718 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 ERMNQ8TAM6 284 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 PSPC1Q8WXF1 523 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 EDEM1Q92611 657 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 PGBD4Q96DM1 585 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 PABPC5Q96DU9 382 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 SCARF2Q96GP6 870 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 CEP170P1Q96L14 293 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 AIFM3Q96NN9 605 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 POP1Q99575 1024 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 RAB34Q9BZG1 259 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 FOXP1Q9H334 677 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 TMX1Q9H3N1 280 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 UBN1Q9NPG3 1134 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 PRDM6Q9NQX0 595 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 SUCLA2Q9P2R7 463 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 EYSQ5T1H1 3165 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 KIAA1217Q5T5P2 1943 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 TBKBP1A7MCY6 615 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 SHISA8B8ZZ34 492 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ADAMTS3O15072 1205 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 SLC37A4O43826 429 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 EDIL3O43854 480 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 RARAP10276 462 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 FDPSP14324 419 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 PCSK2P16519 638 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 NPR3P17342 541 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 MUTP22033 750 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 KCNA5P22460 613 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ALAS2P22557 587 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 AXLP30530 894 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 YWHABP31946 246 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ALDH7A1P49419 539 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 DSC3Q14574 896 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 UGCGQ16739 394 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 MTERF2Q49AM1 385 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 KRT40Q6A162 431 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 KANK3Q6NY19 840 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 GLB1LQ6UWU2 654 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ANO5Q75V66 913 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 FAM228AQ86W67 206 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 HACE1Q8IYU2 909 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 LRRC71Q8N4P6 559 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 KCTD17Q8N5Z5 321 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 NECAB1Q8N987 351 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 CNNM3Q8NE01 707 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 TMEM40Q8WWA1 233 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 HAS1Q92839 578 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ZBTB10Q96DT7 871 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 CCDC51Q96ER9 411 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 C8orf76Q96K31 380 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 LXNQ9BS40 222 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 OSBPL7Q9BZF2 842 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 DHX33Q9H6R0 707 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 TTC12Q9H892 705 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 NGRNQ9NPE2 291 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ANKEF1Q9NU02 776 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 KANSL3Q9P2N6 904 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 VAV3Q9UKW4 847 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 NOL7Q9UMY1 257 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 FNDC3AQ9Y2H6 1198 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 COL4A3BPQ9Y5P4 624 aa6.86□□□□□ -1.31
PTCD3-215ENST00000484203 MRPL42Q9Y6G3 142 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 PRRC2BQ5JSZ5 2229 aaKnown RBP6.86□□□□□ -1.31
PTCD3-215ENST00000484203 ELOA3CA0A087WX78 387 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ELOA3DA6NLF2 546 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-215ENST00000484203 BTBD18B2RXH4 712 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 LAD1O00515 517 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ZNF623O75123 536 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 LINC00271P0C7V0 271 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ALADP13716 330 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TFF2Q03403 129 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 GIT2Q14161 759 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TRIP4Q15650 581 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ELOA3BQ3SY89 546 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 XKR9Q5GH70 373 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TCEAL5Q5H9L2 206 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 HAUS3Q68CZ6 603 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TWF2Q6IBS0 349 aaKnown RBP6.85□□□□□ -1.31
PTCD3-215ENST00000484203 NCAPH2Q6IBW4 605 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 ECHDC2Q86YB7 292 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 RHPN2Q8IUC4 686 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TPH2Q8IWU9 490 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 THNSL1Q8IYQ7 743 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 KLHL23Q8NBE8 558 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 TTC16Q8NEE8 873 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 MCPH1Q8NEM0 835 aa6.85□□□□□ -1.31
PTCD3-215ENST00000484203 FBXO18Q8NFZ0 1043 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms