RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CCDC42Q96M95 316 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 C16orf45Q96MC5 204 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 PCYT2Q99447 389 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 CHP1Q99653 195 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 L2HGDHQ9H9P8 463 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 NHEJ1Q9H9Q4 299 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 POLD4Q9HCU8 107 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 XPNPEP1Q9NQW7 623 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 FAM207AQ9NSI2 230 aaPredicted RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 ARHGAP28Q9P2N2 729 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 R3HCC1Q9Y3T6 440 aaKnown RBP5.89□□□□□ -1.47
COL17A1-206ENST00000483876 IVNS1ABPQ9Y6Y0 642 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 EMSYQ7Z589 1322 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 KMT2EQ8IZD2 1858 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 ZMYM2Q9UBW7 1377 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 TECTAO75443 2155 aa5.89□□□□□ -1.47
COL17A1-206ENST00000483876 DENND3A2RUS2 1198 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CCDC169A6NNP5 214 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 K7ERI5 159 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 NOP56O00567 594 aaKnown RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 DYNC1I1O14576 645 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CLIC2O15247 247 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SLC16A4O15374 487 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 MAGEB2O15479 319 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SEPT4O43236 478 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CTIFO43310 598 aaKnown RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 KIF5CO60282 957 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 HBP1O60381 514 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 LDHAP00338 332 aaKnown RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 GH1P01241 217 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SERPING1P05155 500 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ADRB1P08588 477 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CCDC172P0C7W6 258 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 HOXD8P13378 290 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 UCHL3P15374 230 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ADORA2AP29274 412 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ADSSP30520 456 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 PRKCIP41743 596 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 FMO5P49326 533 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CASP4P49662 377 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 VAMP7P51809 220 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 POLGP54098 1239 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CLDN10P78369 228 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 CDC42EP1Q00587 391 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 POU5F1Q01860 360 aaKnown RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SIGLEC14Q08ET2 396 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 BFSP1Q12934 665 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 GRB14Q14449 540 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 EMC2Q15006 297 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SPA17Q15506 151 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 LY6KQ17RY6 165 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ASTE1Q2TB18 679 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ZNF484Q5JVG2 852 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 HGSNATQ68CP4 663 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 PLA2G4FQ68DD2 849 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ZPBP2Q6X784 338 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 EP400NLQ6ZTU2 488 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ARMCX2Q7L311 632 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 MAEAQ7L5Y9 396 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 RNF10Q8N5U6 811 aaKnown RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 PPTC7Q8NI37 304 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 GDPD5Q8WTR4 605 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 UBE2Q2Q8WVN8 375 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 FAM81BQ96LP2 452 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SPATA33Q96N06 139 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 NFKBIZQ9BYH8 718 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 STK33Q9BYT3 514 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 TSGA10Q9BZW7 698 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 GANQ9H2C0 597 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ABHD16BQ9H3Z7 469 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 LUC7LQ9NQ29 371 aaKnown RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 ERAP1Q9NZ08 941 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 HSPBP1Q9NZL4 362 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 SEPT9Q9UHD8 586 aaPredicted RBP5.88□□□□□ -1.47
COL17A1-206ENST00000483876 COQ4Q9Y3A0 265 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 DMXL1Q9Y485 3027 aa5.88□□□□□ -1.47
COL17A1-206ENST00000483876 KIAA1217Q5T5P2 1943 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 GCN1Q92616 2671 aaKnown RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 TMEM150BA6NC51 233 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 LRRC53A6NM62 1247 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 EPHB6O15197 1021 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 PJA2O43164 708 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 KRT86O43790 486 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ZC3H11AO75152 810 aaKnown RBP eCLIP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ARHGEF15O94989 841 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ARIH2O95376 493 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 SNAI1O95863 264 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 IGHA2P01877 340 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 SLC9A1P19634 815 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 GLRA2P23416 452 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 CASQ1P31415 396 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 CYP2C18P33260 490 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 STAT1P42224 750 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 ARHGAP25P42331 645 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 KLK7P49862 253 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 JAM2P57087 298 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 POLR2FP61218 127 aaKnown RBP5.87□□□□□ -1.47
COL17A1-206ENST00000483876 GNG11P61952 73 aa5.87□□□□□ -1.47
COL17A1-206ENST00000483876 KIF5AQ12840 1032 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms