RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 LAIR1Q6GTX8 287 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 ASAP3Q8TDY4 903 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 LXNQ9BS40 222 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 PARP2Q9UGN5 583 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 MRPS23Q9Y3D9 190 aaKnown RBP12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 PPME1Q9Y570 386 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 F5P12259 2224 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 CNOT1A5YKK6 2376 aaKnown RBP12.08□□□□□ -0.47
SMARCC1-205ENST00000483847 PTGESO14684 152 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 P4HBP07237 508 aaKnown RBP12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 CEBPBP17676 345 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 FCARP24071 287 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 OR1D2P34982 312 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 TUSC3Q13454 348 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 RAB33AQ14088 237 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 CTTNQ14247 550 aaKnown RBP12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 GRM2Q14416 872 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 KRT32Q14532 448 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 PCBP1Q15365 356 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 INF2Q27J81 1249 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 MOXD1Q6UVY6 613 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 C4orf19Q8IY42 314 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 BLIDQ8IZY5 108 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 DYDC2Q96IM9 177 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 MTRQ99707 1265 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 CHRDQ9H2X0 955 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 KCNMB3Q9NPA1 279 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 SH3GLB2Q9NR46 395 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 SEMA4GQ9NTN9 838 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 RAB23Q9ULC3 237 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 KCNH3Q9ULD8 1083 aa12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
SMARCC1-205ENST00000483847 FAM208BQ5VWN6 2430 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 RETP07949 1114 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 POU2F2P09086 479 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 CYP4A11Q02928 519 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 DMWDQ09019 674 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 SRSF5Q13243 272 aaKnown RBP12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 MXD4Q14582 209 aaPredicted RBP12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 NAB2Q15742 525 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 SLC27A1Q6PCB7 646 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 PRR23CQ6ZRP0 262 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 CELF5Q8N6W0 485 aaKnown RBP12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 HAS1Q92839 578 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 C22orf23Q9BZE7 217 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 TICRRQ7Z2Z1 1910 aa12.07□□□□□ -0.48
SMARCC1-205ENST00000483847 ZMYM2Q9UBW7 1377 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 ZFYVE26Q68DK2 2539 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 HRO43593 1189 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 RHOP08100 348 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 GLRA2P23416 452 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 PDIA3P30101 505 aaKnown RBP12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 ARL2P36404 184 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 NRLP54845 237 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 SATB1Q01826 763 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 POU5F1BQ06416 359 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 TFDP1Q14186 410 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 SIM2Q14190 667 aaPredicted RBP12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 GAS6Q14393 721 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 EPHA7Q15375 998 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 CSRP2Q16527 193 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 UVSSAQ2YD98 709 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 NCAPH2Q6IBW4 605 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 OTUD6AQ7L8S5 288 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 DNASE1L2Q92874 299 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 ELSPBP1Q96BH3 223 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 JAKMIP1Q96N16 626 aaKnown RBP12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 BRD9Q9H8M2 597 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 LMAN1LQ9HAT1 526 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 GDE1Q9NZC3 331 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 CDY1Q9Y6F8 540 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 RALGAPA1Q6GYQ0 2036 aa12.06□□□□□ -0.48
SMARCC1-205ENST00000483847 CHURC1-FNTBB4DL54 471 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 LRP3O75074 770 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 FGFR3P22607 806 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 HOXC13P31276 330 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 FNTBP49356 437 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 FAM78AQ5JUQ0 283 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 N4BP2L1Q5TBK1 243 aaPredicted RBP12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 TPH2Q8IWU9 490 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 DAGLBQ8NCG7 672 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 TCEAL4Q96EI5 215 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 FAM20AQ96MK3 541 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 AGXT2Q9BYV1 514 aa12.05□□□□□ -0.48
SMARCC1-205ENST00000483847 ZSWIM4Q9H7M6 989 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms