RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 NSUN3Q9H649 340 aaKnown RBP9.58□□□□□ -0.88
SNX4-205ENST00000482965 TLR9Q9NR96 1032 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 EXOC1Q9NV70 894 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 LZTS1Q9Y250 596 aa9.58□□□□□ -0.88
SNX4-205ENST00000482965 PRG3Q9Y2Y8 225 aaPredicted RBP9.58□□□□□ -0.88
SNX4-205ENST00000482965 ANK1P16157 1881 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 CHD7Q9P2D1 2997 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 A0A0B4J269 797 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TISP43B9A030 160 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 NRP1O14786 923 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 OGTO15294 1046 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 EIF3DO15371 548 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNX4-205ENST00000482965 MAP3K13O43283 966 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 MYL1P05976 194 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 CLTAP09496 248 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 CA8P35219 290 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 IRS1P35568 1242 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 KCNA1Q09470 495 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TUSC3Q13454 348 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 CAMK1Q14012 370 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 BMS1Q14692 1282 aaKnown RBP9.57□□□□□ -0.88
SNX4-205ENST00000482965 POSTNQ15063 836 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TCEAL5Q5H9L2 206 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 PLPP4Q5VZY2 271 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TMC7Q7Z402 723 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TMEM173Q86WV6 379 aaPredicted RBP9.57□□□□□ -0.88
SNX4-205ENST00000482965 POMGNT1Q8WZA1 660 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 PPP2R3CQ969Q6 453 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 CCDC47Q96A33 483 aaKnown RBP9.57□□□□□ -0.88
SNX4-205ENST00000482965 SNX27Q96L92 541 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 IPO9Q96P70 1041 aaKnown RBP9.57□□□□□ -0.88
SNX4-205ENST00000482965 COLEC11Q9BWP8 271 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 CXCL16Q9H2A7 254 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 IKZF4Q9H2S9 585 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TMEM206Q9H813 350 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 RPF1Q9H9Y2 349 aaKnown RBP9.57□□□□□ -0.88
SNX4-205ENST00000482965 ENTPD7Q9NQZ7 604 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
SNX4-205ENST00000482965 UBE4BO95155 1302 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 SMIM28A0A1B0GU29 152 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 CASTOR2A6NHX0 329 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 KLRC4O43908 158 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 RPN1P04843 607 aaKnown RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 CXCL8P10145 99 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 TNFSF9P41273 254 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 ERVFC1P60507 584 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 FAM160A1Q05DH4 1040 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 PPP2R3AQ06190 1150 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 EHHADHQ08426 723 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 SLC10A6Q3KNW5 377 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 ZBTB41Q5SVQ8 909 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 PDE12Q6L8Q7 609 aaKnown RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 ALKAL1Q6UXT8 129 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 DDX53Q86TM3 631 aaKnown RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 FMR1NBQ8N0W7 255 aaPredicted RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 VPS52Q8N1B4 723 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 GLIS3Q8NEA6 775 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 BCL7CQ8WUZ0 217 aaPredicted RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 RABGGTAQ92696 567 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 KIF12Q96FN5 646 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 TCF25Q9BQ70 676 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 SLC39A2Q9NP94 309 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 NGRNQ9NPE2 291 aaKnown RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 MARCH5Q9NX47 278 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 CACNG4Q9UBN1 327 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 STK39Q9UEW8 545 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 AGO2Q9UKV8 859 aaKnown RBP9.56□□□□□ -0.88
SNX4-205ENST00000482965 PCDHGC5Q9Y5F6 944 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 STYXL1Q9Y6J8 313 aa9.56□□□□□ -0.88
SNX4-205ENST00000482965 FSCN2O14926 492 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 GADD45BO75293 160 aaPredicted RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 TADA2AO75478 443 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 KCNE1P15382 129 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 GARTP22102 1010 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ADSSP30520 456 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ACOT2P49753 483 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 DPYDQ12882 1025 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 PSMD2Q13200 908 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 HSP90AA2PQ14568 343 aaPredicted RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 SMC1AQ14683 1233 aaKnown RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 NAB2Q15742 525 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ENOX2Q16206 610 aaKnown RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 XKR4Q5GH76 650 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ARMCX5Q6P1M9 558 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 EP400NLQ6ZTU2 488 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 ADGRD2Q7Z7M1 963 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 NELFCDQ8IXH7 590 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 TMEM87AQ8NBN3 555 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ENGASEQ8NFI3 743 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ZNF507Q8TCN5 953 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 NOC3LQ8WTT2 800 aaKnown RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 UROC1Q96N76 676 aa9.55□□□□□ -0.88
SNX4-205ENST00000482965 ZMAT2Q96NC0 199 aaKnown RBP9.55□□□□□ -0.88
SNX4-205ENST00000482965 PAAF1Q9BRP4 392 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms