RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SNX27Q96L92 541 aa17.82■□□□□ 0.44
CCDC78-212ENST00000482152 PPP1R10Q96QC0 940 aaKnown RBP17.82■□□□□ 0.44
CCDC78-212ENST00000482152 TCF25Q9BQ70 676 aa17.82■□□□□ 0.44
CCDC78-212ENST00000482152 MSTO1Q9BUK6 570 aa17.82■□□□□ 0.44
CCDC78-212ENST00000482152 IRAK3Q9Y616 596 aa17.82■□□□□ 0.44
CCDC78-212ENST00000482152 COL4A4P53420 1690 aaPredicted RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 UBE4BO95155 1302 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 ADRB2P07550 413 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 MYBP10242 640 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 CTSAP10619 480 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 HARSP12081 509 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 ERVFC1P60507 584 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 OSTNP61366 133 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 COL19A1Q14993 1142 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 NAB2Q15742 525 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 SLC10A6Q3KNW5 377 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 SLC39A4Q6P5W5 647 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 EPM2AIP1Q7L775 607 aaPredicted RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 VPS52Q8N1B4 723 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 MRPL43Q8N983 215 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 ATXN2LQ8WWM7 1075 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 POMGNT1Q8WZA1 660 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 HAPLN2Q9GZV7 340 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 RPF1Q9H9Y2 349 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 ENTPD7Q9NQZ7 604 aa17.81■□□□□ 0.44
CCDC78-212ENST00000482152 CGNQ9P2M7 1197 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 HOOK1Q9UJC3 728 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 AGO2Q9UKV8 859 aaKnown RBP17.81■□□□□ 0.44
CCDC78-212ENST00000482152 TTC26A0AVF1 554 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 ANKRD63C9JTQ0 380 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 XPOTO43592 962 aaKnown RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 FAM189A1O60320 539 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 B4GALT3O60512 393 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 TADA2AO75478 443 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 RPL9P32969 192 aaKnown RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 CASP5P51878 434 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 FAM160A1Q05DH4 1040 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 ELAVL2Q12926 359 aaKnown RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 DCLRE1AQ6PJP8 1040 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 FMR1NBQ8N0W7 255 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 PABPC5Q96DU9 382 aaKnown RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 TIGD1Q96MW7 591 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 GOLPH3LQ9H4A5 285 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 ASB7Q9H672 318 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 TLE6Q9H808 572 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 EXOC1Q9NV70 894 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 CPSF3Q9UKF6 684 aaKnown RBP17.8■□□□□ 0.44
CCDC78-212ENST00000482152 ADAM28Q9UKQ2 775 aa17.8■□□□□ 0.44
CCDC78-212ENST00000482152 KIAA1671Q9BY89 1806 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 TCHHQ07283 1943 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-212ENST00000482152 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 KLRC4O43908 158 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 PRPF6O94906 941 aaKnown RBP17.79■□□□□ 0.44
CCDC78-212ENST00000482152 KIF20AO95235 890 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 CXCL14O95715 111 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 EFEMP2O95967 443 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 SOD2P04179 222 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 ADSSP30520 456 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 IRS1P35568 1242 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 PPP2R3AQ06190 1150 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 KCNA1Q09470 495 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 TMEM173Q86WV6 379 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-212ENST00000482152 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 ZBP1Q9H171 429 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 THEGQ9P2T0 379 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 PRG3Q9Y2Y8 225 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-212ENST00000482152 DERAQ9Y315 318 aa17.79■□□□□ 0.44
CCDC78-212ENST00000482152 SF3B1O75533 1304 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 TRAPPC3O43617 180 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 RPN1P04843 607 aaKnown RBP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 CYP3A5P20815 502 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 PAX3P23760 479 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 HYAL1Q12794 435 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 KCNB1Q14721 858 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 BMT2Q1RMZ1 405 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 CTC1Q2NKJ3 1217 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 KMT5BQ4FZB7 885 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 GRAMD1CQ8IYS0 662 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 EFHBQ8N7U6 833 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 GOLGA5Q8TBA6 731 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 BCL7CQ8WUZ0 217 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 FGFBP2Q9BYJ0 223 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 GTPBP4Q9BZE4 634 aaKnown RBP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 MRPL17Q9NRX2 175 aaKnown RBP17.78■□□□□ 0.44
CCDC78-212ENST00000482152 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
CCDC78-212ENST00000482152 COL6A3P12111 3177 aa17.77■□□□□ 0.44
CCDC78-212ENST00000482152 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-212ENST00000482152 C2orf71A6NGG8 1288 aa17.77■□□□□ 0.44
CCDC78-212ENST00000482152 RHOBTB3O94955 611 aa17.77■□□□□ 0.44
CCDC78-212ENST00000482152 IL18RAPO95256 599 aa17.77■□□□□ 0.44
CCDC78-212ENST00000482152 C1RP00736 705 aa17.77■□□□□ 0.44
CCDC78-212ENST00000482152 SRGAP2BP0DMP2 458 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms