RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CCDC157Q569K6 752 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 MIIPQ5JXC2 388 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 ATAT1Q5SQI0 421 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 THEMIS2Q5TEJ8 643 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 IGFL4Q6B9Z1 124 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 USP51Q70EK9 711 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 TTC7BQ86TV6 843 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 SLC35G2Q8TBE7 412 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 MDM1Q8TC05 714 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 EXTL1Q92935 676 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 KAT5Q92993 513 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 ZNF503Q96F45 646 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 IL17RAQ96F46 866 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 OR14A2Q96R54 314 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 PDCD2LQ9BRP1 358 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 PLA2G12BQ9BX93 195 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 SLC12A5Q9H2X9 1139 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 NELFAQ9H3P2 528 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 KMT5AQ9NQR1 393 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 ANLNQ9NQW6 1124 aa4.9□□□□□ -1.63
CBX3-207ENST00000481300 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.9□□□□□ -1.63
CBX3-207ENST00000481300 NPIPB8E9PQR5 432 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 ADCY6O43306 1168 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 CTNND1O60716 968 aaKnown RBP4.89□□□□□ -1.63
CBX3-207ENST00000481300 GPR32O75388 356 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 IL2RBP14784 551 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 GZMKP49863 264 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 ADAM8P78325 824 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 APBA1Q02410 837 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 NRN1LQ496H8 165 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 PRAMEF14Q5SWL7 426 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 MAMDC4Q6UXC1 1216 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 POLNQ7Z5Q5 900 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 ADGRE4PQ86SQ3 457 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 TRMT2AQ8IZ69 625 aaKnown RBP4.89□□□□□ -1.63
CBX3-207ENST00000481300 PRR18Q8N4B5 295 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 DIS3LQ8TF46 1054 aaKnown RBP4.89□□□□□ -1.63
CBX3-207ENST00000481300 C1GALT1C1Q96EU7 318 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 ZNF341Q9BYN7 854 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 LDAHQ9H6V9 325 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 PRDM11Q9NQV5 511 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 MOCS1Q9NZB8 636 aa4.89□□□□□ -1.63
CBX3-207ENST00000481300 AJAP1Q9UKB5 411 aaPredicted RBP4.89□□□□□ -1.63
CBX3-207ENST00000481300 TEX33O43247 280 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 PRC1O43663 620 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 FTLP02792 175 aaPredicted RBP4.88□□□□□ -1.63
CBX3-207ENST00000481300 SLC6A9P48067 706 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 GRM7Q14831 915 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 ATP2B3Q16720 1220 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 PPP4R4Q6NUP7 873 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 B3GNT9Q6UX72 402 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 GADL1Q6ZQY3 521 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 GPR135Q8IZ08 494 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 LILRA3Q8N6C8 439 aaPredicted RBP4.88□□□□□ -1.63
CBX3-207ENST00000481300 REPS2Q8NFH8 660 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 FBXO18Q8NFZ0 1043 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 RAB24Q969Q5 203 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 RGMAQ96B86 450 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 TMEM176AQ96HP8 235 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 TMX3Q96JJ7 454 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 CLPTM1LQ96KA5 538 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 TAAR9Q96RI9 348 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 MAN1C1Q9NR34 630 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 C1orf112Q9NSG2 853 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 POLHQ9Y253 713 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 SIK3Q9Y2K2 1263 aa4.88□□□□□ -1.63
CBX3-207ENST00000481300 MYBBP1AQ9BQG0 1328 aaKnown RBP4.88□□□□□ -1.63
CBX3-207ENST00000481300 CCDC180Q9P1Z9 1646 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 SLC16A6O15403 523 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 RAP2AP10114 183 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 DDCP20711 480 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 FXR1P51114 621 aaKnown RBP eCLIP4.87□□□□□ -1.63
CBX3-207ENST00000481300 DGCR2P98153 550 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 CREMQ03060 361 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 PTH1RQ03431 593 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 FOXL1Q12952 345 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 SP140Q13342 867 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 RAB39AQ14964 217 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 FKBP15Q5T1M5 1219 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 MFSD5Q6N075 450 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 FAM111BQ6SJ93 734 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 SLC4A10Q6U841 1118 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 ZNF572Q7Z3I7 529 aaPredicted RBP4.87□□□□□ -1.63
CBX3-207ENST00000481300 DENND1CQ8IV53 801 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 ZNF808Q8N4W9 903 aaPredicted RBP4.87□□□□□ -1.63
CBX3-207ENST00000481300 C3orf20Q8ND61 904 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 CASKIN2Q8WXE0 1202 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 STON2Q8WXE9 905 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 FAM193BQ96PV7 902 aaPredicted RBP4.87□□□□□ -1.63
CBX3-207ENST00000481300 ACO2Q99798 780 aaKnown RBP4.87□□□□□ -1.63
CBX3-207ENST00000481300 FAM204AQ9H8W3 233 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 AGO3Q9H9G7 860 aaKnown RBP4.87□□□□□ -1.63
CBX3-207ENST00000481300 OBP2AQ9NY56 170 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 HDAC5Q9UQL6 1122 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 PCDHB1Q9Y5F3 818 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 ZMYM3Q14202 1370 aa4.87□□□□□ -1.63
CBX3-207ENST00000481300 H3BML4 177 aa4.86□□□□□ -1.63
CBX3-207ENST00000481300 HOXA3O43365 443 aaPredicted RBP4.86□□□□□ -1.63
CBX3-207ENST00000481300 ARIH2O95376 493 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms