RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 UCKL1Q9NWZ5 548 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 NTMQ9P121 344 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 APOBEC2Q9Y235 224 aaKnown RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 RIPOR2Q9Y4F9 1068 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 LAMB2P55268 1798 aa8.35□□□□□ -1.07
CBX3-206ENST00000481057 PTPRZ1P23471 2315 aaPredicted RBP8.35□□□□□ -1.07
CBX3-206ENST00000481057 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 ZEB2O60315 1214 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 CYP7B1O75881 506 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 EYA4O95677 639 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 ZNF28P17035 718 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 ID4P47928 161 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 SMAD3P84022 425 aaKnown RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 NFKB2Q00653 900 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 KIF22Q14807 665 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 TTLL7Q6ZT98 887 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 C11orf74Q86VG3 221 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 PASD1Q8IV76 773 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 ADGRG2Q8IZP9 1017 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 TP53I13Q8NBR0 393 aaPredicted RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 ERCC4Q92889 916 aaPredicted RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 PTPN18Q99952 460 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 ZMAT4Q9H898 229 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 GALNT8Q9NY28 637 aa8.34□□□□□ -1.07
CBX3-206ENST00000481057 RALYQ9UKM9 306 aaKnown RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 SCAF8Q9UPN6 1271 aaKnown RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 ZFHX2Q9C0A1 2572 aaPredicted RBP8.34□□□□□ -1.07
CBX3-206ENST00000481057 A0A1B0GTL3 188 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 YDJCA8MPS7 323 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 COL6A1P12109 1028 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 MLLT6P55198 1093 aaPredicted RBP8.33□□□□□ -1.08
CBX3-206ENST00000481057 SMAD2Q15796 467 aaKnown RBP8.33□□□□□ -1.08
CBX3-206ENST00000481057 VMACQ2NL98 169 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 RIC1Q4ADV7 1423 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 STPG3Q8N7X2 389 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 RAET1EQ8TD07 263 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 ZCCHC14Q8WYQ9 949 aaKnown RBP8.33□□□□□ -1.08
CBX3-206ENST00000481057 SCYL1Q96KG9 808 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 DEFB118Q96PH6 123 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 FOXB1Q99853 325 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
CBX3-206ENST00000481057 ZSWIM8A7E2V4 1837 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 MAST4O15021 2626 aa8.33□□□□□ -1.08
CBX3-206ENST00000481057 MED19A0JLT2 244 aaPredicted RBP8.32□□□□□ -1.08
CBX3-206ENST00000481057 PSMD14O00487 310 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 BRINP1O60477 761 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 FBXO21O94952 628 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 CHGBP05060 677 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 CPEP16870 476 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 KCNQ1P51787 676 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 PHC1P78364 1004 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 ALDH6A1Q02252 535 aaKnown RBP8.32□□□□□ -1.08
CBX3-206ENST00000481057 PRKG1Q13976 671 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 STAT4Q14765 748 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 ATP13A4Q4VNC1 1196 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 GPR158Q5T848 1215 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 LRSAM1Q6UWE0 723 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 ARMC9Q7Z3E5 817 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 ZZZ3Q8IYH5 903 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 CARFQ8N187 725 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 ZSCAN18Q8TBC5 510 aaPredicted RBP8.32□□□□□ -1.08
CBX3-206ENST00000481057 E2F7Q96AV8 911 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 MPHOSPH9Q99550 1183 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 ZNF318Q5VUA4 2279 aa8.32□□□□□ -1.08
CBX3-206ENST00000481057 FLNBO75369 2602 aaKnown RBP8.31□□□□□ -1.08
CBX3-206ENST00000481057 KNG1P01042 644 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 PRLP01236 227 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 HSP90AB1P08238 724 aaKnown RBP8.31□□□□□ -1.08
CBX3-206ENST00000481057 NF2P35240 595 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
CBX3-206ENST00000481057 IL13RA1P78552 427 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 AMPD3Q01432 767 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 TFF2Q03403 129 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 LRRC32Q14392 662 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 TRMT10BQ6PF06 316 aaKnown RBP8.31□□□□□ -1.08
CBX3-206ENST00000481057 COG3Q96JB2 828 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 BTBD2Q9BX70 525 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 SRRDQ9UH36 339 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 COL4A3BPQ9Y5P4 624 aa8.31□□□□□ -1.08
CBX3-206ENST00000481057 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 NCAPD2Q15021 1401 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 UBA6A0AVT1 1052 aaPredicted RBP8.3□□□□□ -1.08
CBX3-206ENST00000481057 RPS12P25398 132 aaKnown RBP8.3□□□□□ -1.08
CBX3-206ENST00000481057 CD40P25942 277 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 IL13P35225 146 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 ADCY1Q08828 1119 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 KIAA2012Q0VF49 1180 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 SHHQ15465 462 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 STILQ15468 1287 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 TERF2Q15554 542 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 AAK1Q2M2I8 961 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 LHFPL2Q6ZUX7 228 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 SUPT20HQ8NEM7 779 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 CALML6Q8TD86 181 aa8.3□□□□□ -1.08
CBX3-206ENST00000481057 RTF1Q92541 710 aaKnown RBP8.3□□□□□ -1.08
CBX3-206ENST00000481057 SLC5A5Q92911 643 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms