RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 PPM1AP35813 382 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 LIG4P49917 911 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 ASIC1P78348 528 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 UBE3AQ05086 875 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 DLX2Q07687 328 aaPredicted RBP13.37□□□□□ -0.27
PTPRF-213ENST00000481019 EHHADHQ08426 723 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 GRIK3Q13003 919 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.274e-9■■□□□ 13.3
PTPRF-213ENST00000481019 COL19A1Q14993 1142 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 SLC10A6Q3KNW5 377 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 XKR4Q5GH76 650 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 CD300LGQ6UXG3 332 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 VN1R2Q8NFZ6 395 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 SNX27Q96L92 541 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
PTPRF-213ENST00000481019 TCF25Q9BQ70 676 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 IGFLR1Q9H665 355 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 FAN1Q9Y2M0 1017 aa13.37□□□□□ -0.27
PTPRF-213ENST00000481019 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 A0A0B4J269 797 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 SMIM28A0A1B0GU29 152 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 H0YCG3 227 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 HNRNPDLO14979 420 aaKnown RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 CLDN3O15551 220 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 GCNT3O95395 438 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 ALDH2P05091 517 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 CXCL8P10145 99 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 LTBRP36941 435 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 NRIP1P48552 1158 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 SPAG1Q07617 926 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 VPS52Q8N1B4 723 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 HASPINQ8TF76 798 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 RSPH1Q8WYR4 309 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 C18orf25Q96B23 403 aaPredicted RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 TMEM169Q96HH4 297 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 B3GALT6Q96L58 329 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 RPS6KC1Q96S38 1066 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 CCDC94Q9BW85 323 aaPredicted RBP13.36□□□□□ -0.27
PTPRF-213ENST00000481019 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
PTPRF-213ENST00000481019 CITO14578 2027 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 KIF4AO95239 1232 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 GLP2RO95838 553 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 THP07101 528 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 MATR3P43243 847 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■□□ 15.7
PTPRF-213ENST00000481019 SYKP43405 635 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 KCNQ1P51787 676 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 WNT7BP56706 349 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 KRT17Q04695 432 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 ENOX2Q16206 610 aaKnown RBP13.35□□□□□ -0.27
PTPRF-213ENST00000481019 CTC1Q2NKJ3 1217 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 CRELD2Q6UXH1 353 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-213ENST00000481019 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-213ENST00000481019 CCDC65Q8IXS2 484 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 RNF168Q8IYW5 571 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-213ENST00000481019 FEZF2Q8TBJ5 459 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-213ENST00000481019 MAGEF1Q9HAY2 307 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 ENTPD7Q9NQZ7 604 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 THEGQ9P2T0 379 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
PTPRF-213ENST00000481019 STYXL1Q9Y6J8 313 aa13.35□□□□□ -0.27
PTPRF-213ENST00000481019 ANK1P16157 1881 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 LACTBL1A8MY62 500 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
PTPRF-213ENST00000481019 LILRB3O75022 631 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 GADD45BO75293 160 aaPredicted RBP13.34□□□□□ -0.27
PTPRF-213ENST00000481019 TBX10O75333 385 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 CXCL14O95715 111 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 KCNE1P15382 129 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 ACOT2P49753 483 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 GUCY2FP51841 1108 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 ADAM15Q13444 863 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 TUSC3Q13454 348 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 TMC7Q7Z402 723 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 CEP57L1Q8IYX8 460 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 MRPL43Q8N983 215 aaKnown RBP13.34□□□□□ -0.27
PTPRF-213ENST00000481019 C3orf58Q8NDZ4 430 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 HLA-CQ95604 372 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 HVCN1Q96D96 273 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 FAM84AQ96KN4 292 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 ACCSQ96QU6 501 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 TUBGCP4Q9UGJ1 667 aa13.34□□□□□ -0.27
PTPRF-213ENST00000481019 PUF60Q9UHX1 559 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms