RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 CLTAP09496 248 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 FOSL2P15408 326 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 IGFBP4P22692 258 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 OR1G1P47890 313 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 DSC1Q08554 894 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 ENOX2Q16206 610 aaKnown RBP16.5■□□□□ 0.23
ABCF3-213ENST00000480539 CAMK4Q16566 473 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 TMEM173Q86WV6 379 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-213ENST00000480539 BCL7CQ8WUZ0 217 aaPredicted RBP16.5■□□□□ 0.23
ABCF3-213ENST00000480539 ALG13Q9NP73 1137 aaKnown RBP16.5■□□□□ 0.23
ABCF3-213ENST00000480539 AGPAT3Q9NRZ7 376 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 RMND1Q9NWS8 449 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 CNTN3Q9P232 1028 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
ABCF3-213ENST00000480539 MAPK8IP1Q9UQF2 711 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 F8W810 466 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 GRM6O15303 877 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 FGF18O76093 207 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 RB1P06400 928 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 THP07101 528 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 GALTP07902 379 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 GARTP22102 1010 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 PPM1AP35813 382 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 ALDH7A1P49419 539 aaKnown RBP16.49■□□□□ 0.23
ABCF3-213ENST00000480539 CYP2J2P51589 502 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 SPAG1Q07617 926 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 NAB2Q15742 525 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 KYAT1Q16773 422 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 KNOP1Q1ED39 458 aaKnown RBP16.49■□□□□ 0.23
ABCF3-213ENST00000480539 SLC10A6Q3KNW5 377 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 COLGALT2Q8IYK4 626 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 SLC39A11Q8N1S5 342 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 MICALL1Q8N3F8 863 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 RABGGTAQ92696 567 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 P2RX5Q93086 422 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 ZMAT2Q96NC0 199 aaKnown RBP16.49■□□□□ 0.23
ABCF3-213ENST00000480539 GSDMAQ96QA5 445 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 PPP1R10Q96QC0 940 aaKnown RBP16.49■□□□□ 0.23
ABCF3-213ENST00000480539 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 RPF1Q9H9Y2 349 aaKnown RBP16.49■□□□□ 0.23
ABCF3-213ENST00000480539 GOLGA2P5Q9HBQ8 144 aa16.49■□□□□ 0.23
ABCF3-213ENST00000480539 SMIM28A0A1B0GU29 152 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-213ENST00000480539 BIN1O00499 593 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 NRP1O14786 923 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 CLIC2O15247 247 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-213ENST00000480539 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 ELOA2Q8IYF1 753 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-213ENST00000480539 TMEM130Q8N3G9 435 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 C18orf25Q96B23 403 aaPredicted RBP16.48■□□□□ 0.23
ABCF3-213ENST00000480539 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 TMEM175Q9BSA9 504 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 CLSTN2Q9H4D0 955 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 SPG21Q9NZD8 308 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 HSPBP1Q9NZL4 362 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 TUBGCP4Q9UGJ1 667 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 MAN1B1Q9UKM7 699 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 ATG2AQ2TAZ0 1938 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 CITO14578 2027 aa16.48■□□□□ 0.23
ABCF3-213ENST00000480539 TTC26A0AVF1 554 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 LACTBL1A8MY62 500 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 DNAJB1P25685 340 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 SOX4Q06945 474 aaPredicted RBP16.47■□□□□ 0.23
ABCF3-213ENST00000480539 TUSC3Q13454 348 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 HASPINQ8TF76 798 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 POF1BQ8WVV4 589 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 TMEM169Q96HH4 297 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 IGSF21Q96ID5 467 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 KCTD10Q9H3F6 313 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 MARCH5Q9NX47 278 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 FAN1Q9Y2M0 1017 aa16.47■□□□□ 0.23
ABCF3-213ENST00000480539 PDCD11Q14690 1871 aaKnown RBP16.47■□□□□ 0.23
ABCF3-213ENST00000480539 EXTL3O43909 919 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 KIF20AO95235 890 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 KIF4AO95239 1232 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 NFICP08651 508 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 KCNE1P15382 129 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 WNT7BP56706 349 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 ZNF658Q5TYW1 1059 aaPredicted RBP16.46■□□□□ 0.23
ABCF3-213ENST00000480539 JADE1Q6IE81 842 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 CBWD2Q8IUF1 395 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 BRSK2Q8IWQ3 736 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 GUF1Q8N442 669 aaKnown RBP16.46■□□□□ 0.23
ABCF3-213ENST00000480539 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 NUP62CLQ9H1M0 184 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 PLEKHA5Q9HAU0 1116 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 RBAKQ9NYW8 714 aaPredicted RBP16.46■□□□□ 0.23
ABCF3-213ENST00000480539 PCDHGC5Q9Y5F6 944 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms