RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 TLR9Q9NR96 1032 aa13.18□□□□□ -0.3
CCM2-212ENST00000480382 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
CCM2-212ENST00000480382 MARCH5Q9NX47 278 aa13.18□□□□□ -0.3
CCM2-212ENST00000480382 EXOC7Q9UPT5 735 aa13.18□□□□□ -0.3
CCM2-212ENST00000480382 SPTBN5Q9NRC6 3674 aaKnown RBP13.18□□□□□ -0.3
CCM2-212ENST00000480382 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCM2-212ENST00000480382 MYL1P05976 194 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 ADSSP30520 456 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 ERVFC1P60507 584 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 KRT17Q04695 432 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
CCM2-212ENST00000480382 KMT5BQ4FZB7 885 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 TCEAL5Q5H9L2 206 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 EPM2AIP1Q7L775 607 aaPredicted RBP13.17□□□□□ -0.3
CCM2-212ENST00000480382 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 RABGGTAQ92696 567 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
CCM2-212ENST00000480382 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 VN1R3Q9BXE9 311 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 NSUN3Q9H649 340 aaKnown RBP13.17□□□□□ -0.3
CCM2-212ENST00000480382 SLC39A2Q9NP94 309 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 CNTN3Q9P232 1028 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 LZTS1Q9Y250 596 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
CCM2-212ENST00000480382 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 FSCN2O14926 492 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 NR1I2O75469 434 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
CCM2-212ENST00000480382 ALDH2P05091 517 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 CLTAP09496 248 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 DPYDQ12882 1025 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
CCM2-212ENST00000480382 SLC10A6Q3KNW5 377 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 XKR4Q5GH76 650 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 ALKAL1Q6UXT8 129 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 NELFCDQ8IXH7 590 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 SCFD1Q8WVM8 642 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
CCM2-212ENST00000480382 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 PRDM6Q9NQX0 595 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 ENTPD7Q9NQZ7 604 aa13.16□□□□□ -0.3
CCM2-212ENST00000480382 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
CCM2-212ENST00000480382 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
CCM2-212ENST00000480382 UBE4BO95155 1302 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 KIF4AO95239 1232 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 KCNE1P15382 129 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 CA8P35219 290 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 HOXD13P35453 343 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 ACOT2P49753 483 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 PPP2R3AQ06190 1150 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 SOX4Q06945 474 aaPredicted RBP13.15□□□□□ -0.3
CCM2-212ENST00000480382 SPAG1Q07617 926 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 PNOCQ13519 176 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
CCM2-212ENST00000480382 POSTNQ15063 836 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
CCM2-212ENST00000480382 KYAT1Q16773 422 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 TMC7Q7Z402 723 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
CCM2-212ENST00000480382 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 KIAA0895Q8NCT3 520 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 ZSWIM2Q8NEG5 633 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 ZNF507Q8TCN5 953 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 SAAL1Q96ER3 474 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 ZBP1Q9H171 429 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
CCM2-212ENST00000480382 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
CCM2-212ENST00000480382 VWA8A3KMH1 1905 aa13.15□□□□□ -0.3
CCM2-212ENST00000480382 TTC26A0AVF1 554 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 GARTP22102 1010 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCM2-212ENST00000480382 CLCNKBP51801 687 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 HYAL1Q12794 435 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 STK4Q13043 487 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
CCM2-212ENST00000480382 BMT2Q1RMZ1 405 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 TMEM130Q8N3G9 435 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 NOC3LQ8WTT2 800 aaKnown RBP13.14□□□□□ -0.31
CCM2-212ENST00000480382 AUTS2Q8WXX7 1259 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
CCM2-212ENST00000480382 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
CCM2-212ENST00000480382 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms