RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PIN4Q9Y237 131 aaKnown RBP9.94□□□□□ -0.82
VCP-206ENST00000480327 FSD2A1L4K1 749 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 GCNT3O95395 438 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 RPN1P04843 607 aaKnown RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 MYBP10242 640 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 MAPTP10636 758 aaKnown RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 ZSCAN20P17040 1043 aaPredicted RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 HOXB8P17481 243 aaPredicted RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 GAP43P17677 238 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 PPM1AP35813 382 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 NCKAP1LP55160 1127 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 BCAR1P56945 870 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 DPYDQ12882 1025 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 PRPF4BQ13523 1007 aaKnown RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 POSTNQ15063 836 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 CAMK4Q16566 473 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 MAPK6Q16659 721 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 AMHR2Q16671 573 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 KMT5BQ4FZB7 885 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 UNC13DQ70J99 1090 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 TAS1R3Q7RTX0 852 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 TMC7Q7Z402 723 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 TMEM105Q8N8V8 129 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 RNF169Q8NCN4 708 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 KREMEN2Q8NCW0 462 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 TMEM161BQ8NDZ6 487 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 GLIS3Q8NEA6 775 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 SLC22A17Q8WUG5 538 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 LPPQ93052 612 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 RIPOR3Q96MK2 946 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 FIZ1Q96SL8 496 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 NTPCRQ9BSD7 190 aaKnown RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 NFKBIZQ9BYH8 718 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 ZBP1Q9H171 429 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 ADAM7Q9H2U9 754 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 FZD8Q9H461 694 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 PRMT7Q9NVM4 692 aaPredicted RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 RNF216Q9NWF9 866 aaPredicted RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 ARHGAP28Q9P2N2 729 aa9.93□□□□□ -0.82
VCP-206ENST00000480327 PUF60Q9UHX1 559 aaKnown RBP9.93□□□□□ -0.82
VCP-206ENST00000480327 RIF1Q5UIP0 2472 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 PHLPP2Q6ZVD8 1323 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 FRMD3A2A2Y4 597 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 ACKR2O00590 384 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 HOXA2O43364 376 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 KLRC4O43908 158 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 EOMESO95936 686 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 ASGR2P07307 311 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 EPCAMP16422 314 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 ARF4P18085 180 aaPredicted RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 HOXA11P31270 313 aaPredicted RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 MCM4P33991 863 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 AFF1P51825 1210 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 CASP5P51878 434 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 EFNA5P52803 228 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 NCBP1Q09161 790 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 STRN3Q13033 797 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 SMC1AQ14683 1233 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 NT5DC1Q5TFE4 455 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 EEF1DP3Q658K8 133 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 ISM2Q6H9L7 571 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 TWF2Q6IBS0 349 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 CNNM4Q6P4Q7 775 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 ZNF720Q7Z2F6 126 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 GPT2Q8TD30 523 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 CASP10Q92851 521 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 BICD1Q96G01 975 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 CCDC34Q96HJ3 373 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 TIGD1Q96MW7 591 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 TARS2Q9BW92 718 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 TRAIPQ9BWF2 469 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 EIF2AQ9BY44 585 aaKnown RBP9.92□□□□□ -0.82
VCP-206ENST00000480327 IKZF4Q9H2S9 585 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 NRDE2Q9H7Z3 1164 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 SLC39A2Q9NP94 309 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 AGPAT5Q9NUQ2 364 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 EXOC1Q9NV70 894 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 DNAJB4Q9UDY4 337 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 KCNG1Q9UIX4 513 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 TBX20Q9UMR3 447 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 FANCMQ8IYD8 2048 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 FAM186AA6NE01 2351 aa9.92□□□□□ -0.82
VCP-206ENST00000480327 CNTNAP2Q9UHC6 1331 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 PVALEFA0A1B0GWK0 134 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 H0Y858 1186 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 H0YCG3 227 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 PRPF6O94906 941 aaKnown RBP9.91□□□□□ -0.82
VCP-206ENST00000480327 NPTXRO95502 500 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 CXCL14O95715 111 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 HARSP12081 509 aaKnown RBP9.91□□□□□ -0.82
VCP-206ENST00000480327 MATR3P43243 847 aaKnown RBP eCLIP9.91□□□□□ -0.82
VCP-206ENST00000480327 KRT17Q04695 432 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 KCNA1Q09470 495 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 FAM187BQ17R55 369 aa9.91□□□□□ -0.82
VCP-206ENST00000480327 FAM26FQ5R3K3 315 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms