RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 VPS72Q15906 364 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 FNDC7Q5VTL7 733 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 ABHD15Q6UXT9 468 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 ZNF276Q8N554 614 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 AUTS2Q8WXX7 1259 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 CLIP3Q96DZ5 547 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 PRDM12Q9H4Q4 367 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 NRDE2Q9H7Z3 1164 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 EIF2B4Q9UI10 523 aaKnown RBP7.13□□□□□ -1.27
COMMD3-212ENST00000479958 ZBTB21Q9ULJ3 1066 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.13□□□□□ -1.27
COMMD3-212ENST00000479958 SORCS3Q9UPU3 1222 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 PLA2R1Q13018 1463 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 TSPOAP1O95153 1857 aa7.13□□□□□ -1.27
COMMD3-212ENST00000479958 DHX29Q7Z478 1369 aaKnown RBP7.13□□□□□ -1.27
COMMD3-212ENST00000479958 ERBINQ96RT1 1412 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 NEO1Q92859 1461 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 KIF3BO15066 747 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 SCAND1P57086 179 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 TMPRSS15P98073 1019 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 SLC25A3Q00325 362 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 C1QL3Q5VWW1 255 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 BTNL9Q6UXG8 535 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 ATL2Q8NHH9 583 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 CPT1CQ8TCG5 803 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 LMBR1Q8WVP7 490 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 SPON1Q9HCB6 807 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 GPRC5DQ9NZD1 345 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 TRPS1Q9UHF7 1281 aa7.12□□□□□ -1.27
COMMD3-212ENST00000479958 ING1Q9UK53 422 aaPredicted RBP7.12□□□□□ -1.27
COMMD3-212ENST00000479958 PPRC1Q5VV67 1664 aaKnown RBP7.12□□□□□ -1.27
COMMD3-212ENST00000479958 RPRD2Q5VT52 1461 aaKnown RBP7.12□□□□□ -1.27
COMMD3-212ENST00000479958 TRIM24O15164 1050 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 ITGA10O75578 1167 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 RPS6KA4O75676 772 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 SCAF4O95104 1147 aaKnown RBP7.11□□□□□ -1.27
COMMD3-212ENST00000479958 VIL1P09327 827 aaKnown RBP7.11□□□□□ -1.27
COMMD3-212ENST00000479958 CRHR1P34998 444 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 DPTQ07507 201 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 RNF219Q5W0B1 726 aaPredicted RBP7.11□□□□□ -1.27
COMMD3-212ENST00000479958 GPR156Q8NFN8 814 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 OR52N2Q8NGI0 321 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 AHCYL2Q96HN2 611 aaKnown RBP7.11□□□□□ -1.27
COMMD3-212ENST00000479958 DCLRE1CQ96SD1 692 aaKnown RBP7.11□□□□□ -1.27
COMMD3-212ENST00000479958 WDR33Q9C0J8 1336 aaKnown RBP7.11□□□□□ -1.27
COMMD3-212ENST00000479958 ZNF518AQ6AHZ1 1483 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 TEX14Q8IWB6 1497 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 KDM5CP41229 1560 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 FRMPD1Q5SYB0 1578 aa7.11□□□□□ -1.27
COMMD3-212ENST00000479958 IQGAP3Q86VI3 1631 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 B5MCH6 92 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 AKR1B10O60218 316 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 EYA4O95677 639 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 CFBP00751 764 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 MGAT1P26572 445 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 EFCAB12Q6NXP0 572 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 SPATS2Q86XZ4 545 aaKnown RBP7.1□□□□□ -1.27
COMMD3-212ENST00000479958 TGFBRAP1Q8WUH2 860 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 ZNF480Q8WV37 535 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 PRRX2Q99811 253 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 NDC1Q9BTX1 674 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 KRTAP17-1Q9BYP8 105 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 YEATS2Q9ULM3 1422 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 MAGI2Q86UL8 1455 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 CFAP74Q9C0B2 1584 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 TMEM127O75204 238 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 INHBCP55103 352 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 ANO4Q32M45 955 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 EGFLAMQ63HQ2 1017 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 DRICH1Q6PGQ1 229 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-212ENST00000479958 XYLT1Q86Y38 959 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 RIN2Q8WYP3 895 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-212ENST00000479958 LSM14BQ9BX40 385 aaKnown RBP7.1□□□□□ -1.27
COMMD3-212ENST00000479958 KCNH6Q9H252 994 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 IFT122Q9HBG6 1241 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 POGKQ9P215 609 aa7.1□□□□□ -1.27
COMMD3-212ENST00000479958 KIF13AQ9H1H9 1805 aa7.09□□□□□ -1.27
COMMD3-212ENST00000479958 A2MP01023 1474 aa7.09□□□□□ -1.27
COMMD3-212ENST00000479958 MLH3Q9UHC1 1453 aa7.09□□□□□ -1.27
COMMD3-212ENST00000479958 ABCA6Q8N139 1617 aa7.09□□□□□ -1.27
COMMD3-212ENST00000479958 MROH1Q8NDA8 1641 aa7.09□□□□□ -1.27
COMMD3-212ENST00000479958 RICTORQ6R327 1708 aa7.09□□□□□ -1.27
COMMD3-212ENST00000479958 TMEM191CA6NGB0 347 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 TBKBP1A7MCY6 615 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 GPR39O43194 453 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 PURAQ00577 322 aaKnown RBP7.09□□□□□ -1.28
COMMD3-212ENST00000479958 MUM1Q2TAK8 710 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 MUM1L1Q5H9M0 696 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 GPRIN1Q7Z2K8 1008 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 ULK2Q8IYT8 1036 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 MDM1Q8TC05 714 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 LENG9Q96B70 501 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 ORAI2Q96SN7 254 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 QRSL1Q9H0R6 528 aaKnown RBP7.09□□□□□ -1.28
COMMD3-212ENST00000479958 SLITRK6Q9H5Y7 841 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 GREM2Q9H772 168 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 C14orf119Q9NWQ9 140 aa7.09□□□□□ -1.28
COMMD3-212ENST00000479958 FZD1Q9UP38 647 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms