RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CACNA1BQ00975 2339 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 B4GALT5O43286 388 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 DGAT1O75907 488 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 PSMA5P28066 241 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 ADCY1Q08828 1119 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 CTTNQ14247 550 aaKnown RBP17.84■□□□□ 0.45
DDX56-210ENST00000479440 NPY5RQ15761 445 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 AXDND1Q5T1B0 1012 aaPredicted RBP17.84■□□□□ 0.45
DDX56-210ENST00000479440 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
DDX56-210ENST00000479440 TSSK4Q6SA08 328 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 NETO1Q8TDF5 533 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 ASAP3Q8TDY4 903 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 ING5Q8WYH8 240 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 PAAF1Q9BRP4 392 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 GDE1Q9NZC3 331 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 RGL1Q9NZL6 768 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
DDX56-210ENST00000479440 A0A1B0GUA9 196 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 DCDC2BA2VCK2 349 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 CCNT1O60563 726 aaKnown RBP17.83■□□□□ 0.44
DDX56-210ENST00000479440 HSPA4P34932 840 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 EVCP57679 992 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 LAIR1Q6GTX8 287 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.83■□□□□ 0.44
DDX56-210ENST00000479440 CDR2LQ86X02 465 aaPredicted RBP17.83■□□□□ 0.44
DDX56-210ENST00000479440 SLFN12Q8IYM2 578 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 PRIMPOLQ96LW4 560 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 HEBP1Q9NRV9 189 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 HCFC1R1Q9NWW0 138 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 DNMT3BQ9UBC3 853 aaKnown RBP17.83■□□□□ 0.44
DDX56-210ENST00000479440 MRPS23Q9Y3D9 190 aaKnown RBP17.83■□□□□ 0.44
DDX56-210ENST00000479440 FRYLO94915 3013 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 CACNA1IQ9P0X4 2223 aa17.83■□□□□ 0.44
DDX56-210ENST00000479440 MAN2B1O00754 1011 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
DDX56-210ENST00000479440 THP07101 528 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 MTAPQ13126 283 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 RAB33AQ14088 237 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 TPH2Q8IWU9 490 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 ELSPBP1Q96BH3 223 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 PARD6AQ9NPB6 346 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 PRMT7Q9NVM4 692 aaPredicted RBP17.82■□□□□ 0.44
DDX56-210ENST00000479440 MTRRQ9UBK8 725 aa17.82■□□□□ 0.44
DDX56-210ENST00000479440 LRP3O75074 770 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 XBP1P17861 261 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 TGM1P22735 817 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 GLRA2P23416 452 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 OR1D2P34982 312 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 ARL2P36404 184 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 CCR3P51677 355 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 HAS1Q92839 578 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 POLR3FQ9H1D9 316 aaPredicted RBP17.81■□□□□ 0.44
DDX56-210ENST00000479440 CHRDQ9H2X0 955 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 ANKEF1Q9NU02 776 aa17.81■□□□□ 0.44
DDX56-210ENST00000479440 KMT2BQ9UMN6 2715 aaPredicted RBP17.81■□□□□ 0.44
DDX56-210ENST00000479440 GPR179Q6PRD1 2367 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 LRRIQ4A6NIV6 560 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 PTGESO14684 152 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 SLC30A4O14863 429 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 N4BP3O15049 544 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 ZBTB39O15060 712 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 ADAM12O43184 909 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 LYPLA2O95372 231 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 RHOP08100 348 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 SPIRE1Q08AE8 756 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 SPEM2Q0P670 501 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 TMEM132AQ24JP5 1023 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 PPM1JQ5JR12 505 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 CELF5Q8N6W0 485 aaKnown RBP17.8■□□□□ 0.44
DDX56-210ENST00000479440 MCRS1Q96EZ8 462 aa17.8■□□□□ 0.44
DDX56-210ENST00000479440 AVENQ9NQS1 362 aaPredicted RBP17.8■□□□□ 0.44
DDX56-210ENST00000479440 NDRG2Q9UN36 371 aaKnown RBP17.8■□□□□ 0.44
DDX56-210ENST00000479440 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 RECQL4O94761 1208 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 RETP07949 1114 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 TDGF1P13385 188 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
DDX56-210ENST00000479440 CHAMP1Q96JM3 812 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 EIF2AK1Q9BQI3 630 aaKnown RBP17.79■□□□□ 0.44
DDX56-210ENST00000479440 ADPGKQ9BRR6 497 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 BRD9Q9H8M2 597 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 KCNJ14Q9UNX9 436 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 CDY1Q9Y6F8 540 aa17.79■□□□□ 0.44
DDX56-210ENST00000479440 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.79■□□□□ 0.44
DDX56-210ENST00000479440 ZFHX4Q86UP3 3567 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 FOXD2O60548 495 aaPredicted RBP17.78■□□□□ 0.44
DDX56-210ENST00000479440 USO1O60763 962 aaKnown RBP17.78■□□□□ 0.44
DDX56-210ENST00000479440 SLITRK3O94933 977 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 LRG1P02750 347 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 CEBPBP17676 345 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 FGFR3P22607 806 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 RARRES1P49788 294 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 FZD5Q13467 585 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 LPAL2Q16609 132 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 SLC5A9Q2M3M2 681 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms