RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SMIM28A0A1B0GU29 152 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 TTC26A0AVF1 554 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 GOLGA6L4A6NEF3 574 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 TMEM189-UBE2V1I3L0A0 370 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 GCNT3O95395 438 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 C1RP00736 705 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 GARTP22102 1010 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 CTC1Q2NKJ3 1217 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 CEP120Q8N960 986 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 TMEM87AQ8NBN3 555 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 ATXN2LQ8WWM7 1075 aaKnown RBP16.89■□□□□ 0.29
C9orf3-217ENST00000479161 SNX27Q96L92 541 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 KLK14Q9P0G3 267 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
C9orf3-217ENST00000479161 ANKFY1Q9P2R3 1169 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 SSX2IPQ9Y2D8 614 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 GDAQ9Y2T3 454 aa16.89■□□□□ 0.29
C9orf3-217ENST00000479161 NCOR1O75376 2440 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 ZNF202O95125 648 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 LDHAP00338 332 aaKnown RBP16.88■□□□□ 0.29
C9orf3-217ENST00000479161 CTSAP10619 480 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 ERVFC1P60507 584 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 CUL4BQ13620 913 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 BMT2Q1RMZ1 405 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 KRBA2Q6ZNG9 492 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 ZBTB33Q86T24 672 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 FMR1NBQ8N0W7 255 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-217ENST00000479161 MRPL43Q8N983 215 aaKnown RBP16.88■□□□□ 0.29
C9orf3-217ENST00000479161 TMEM174Q8WUU8 243 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
C9orf3-217ENST00000479161 DDX27Q96GQ7 796 aaKnown RBP16.88■□□□□ 0.29
C9orf3-217ENST00000479161 TIGD1Q96MW7 591 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 GBP3Q9H0R5 595 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 ZBP1Q9H171 429 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
C9orf3-217ENST00000479161 CPSF3Q9UKF6 684 aaKnown RBP16.88■□□□□ 0.29
C9orf3-217ENST00000479161 NT5C1B-RDH14C9J2C7 533 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 KLRC4O43908 158 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 SOD2P04179 222 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 CYP3A5P20815 502 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 ADSSP30520 456 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
C9orf3-217ENST00000479161 PBX3P40426 434 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 AFMP43652 599 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 OR1G1P47890 313 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 CASP5P51878 434 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-217ENST00000479161 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
C9orf3-217ENST00000479161 ZBTB6Q15916 424 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 AAK1Q2M2I8 961 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 TCEAL5Q5H9L2 206 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 TMEM184AQ6ZMB5 413 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 CLEC17AQ6ZS10 378 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 TMEM173Q86WV6 379 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-217ENST00000479161 ENGASEQ8NFI3 743 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 HLA-CQ95604 372 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 TCF25Q9BQ70 676 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 MSTO1Q9BUK6 570 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 ASB7Q9H672 318 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 CHST7Q9NS84 486 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 THEGQ9P2T0 379 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 DERAQ9Y315 318 aa16.87■□□□□ 0.29
C9orf3-217ENST00000479161 ANK1P16157 1881 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 ANKRD63C9JTQ0 380 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 MYBP10242 640 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 PAX3P23760 479 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 IRS1P35568 1242 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 FAM160A1Q05DH4 1040 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 KCNA1Q09470 495 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 ELAVL2Q12926 359 aaKnown RBP16.86■□□□□ 0.29
C9orf3-217ENST00000479161 SNW1Q13573 536 aaKnown RBP16.86■□□□□ 0.29
C9orf3-217ENST00000479161 KCNB1Q14721 858 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 CCDC85BQ15834 202 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-217ENST00000479161 DCLRE1AQ6PJP8 1040 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 TMC7Q7Z402 723 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 NT5DC4Q86YG4 428 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 EFHBQ8N7U6 833 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 GOLPH3LQ9H4A5 285 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 RPF1Q9H9Y2 349 aaKnown RBP16.86■□□□□ 0.29
C9orf3-217ENST00000479161 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 ADAM28Q9UKQ2 775 aa16.86■□□□□ 0.29
C9orf3-217ENST00000479161 AGO2Q9UKV8 859 aaKnown RBP16.86■□□□□ 0.29
C9orf3-217ENST00000479161 MEFVO15553 781 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 XPOTO43592 962 aaKnown RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 LILRB3O75022 631 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 MATR3P43243 847 aaKnown RBP eCLIP16.85■□□□□ 0.293e-6■□□□□ 11.2
C9orf3-217ENST00000479161 HYAL1Q12794 435 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 DPYDQ12882 1025 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 ADAM15Q13444 863 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 KCNC3Q14003 757 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 ENOX2Q16206 610 aaKnown RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 DUSP6Q16828 381 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 UPP1Q16831 310 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 C12orf56Q8IXR9 622 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 SYCP3Q8IZU3 236 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms