RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ELMO3Q96BJ8 720 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 YME1L1Q96TA2 773 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PHF20Q9BVI0 1012 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 SIL1Q9H173 461 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 MS4A5Q9H3V2 200 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 MKNK2Q9HBH9 465 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 RABL2AQ9UBK7 228 aaPredicted RBP6.52□□□□□ -1.37
RC3H1-204ENST00000479099 STXBP5LQ9Y2K9 1186 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 PCDHGB5Q9Y5G0 923 aa6.52□□□□□ -1.37
RC3H1-204ENST00000479099 WNT9AO14904 365 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SHOXO15266 292 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 TSPAN3O60637 253 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 USP2O75604 605 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 PLATP00750 562 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 CYP17A1P05093 508 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SRGAP2CP0DJJ0 459 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ITGA4P13612 1032 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 OSMP13725 252 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ECI1P42126 302 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SSR1P43307 286 aaKnown RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 CEBPAP49715 358 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 CREMQ03060 361 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 AP1B1Q10567 949 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 PAK1Q13153 545 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SMAD1Q15797 465 aaKnown RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ADCK5Q3MIX3 580 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 TOR2AQ5JU69 321 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 LRCH2Q5VUJ6 765 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 GPR139Q6DWJ6 353 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ALKBH5Q6P6C2 394 aaKnown RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SPRED2Q7Z698 418 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SLC9B2Q86UD5 537 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 MCATQ8IVS2 390 aaKnown RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 HERC6Q8IVU3 1022 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 RPAP2Q8IXW5 612 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 OR8H3Q8N146 312 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 C2orf69Q8N8R5 385 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 FAM181AQ8N9Y4 354 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 KLHDC4Q8TBB5 520 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 STT3BQ8TCJ2 826 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 RUBCNQ92622 972 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ZUFSPQ96AP4 578 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 RBM18Q96H35 190 aaKnown RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 PPP1R9BQ96SB3 815 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 PTPN18Q99952 460 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 C7orf25Q9BPX7 421 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 BRIP1Q9BX63 1249 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SENP6Q9GZR1 1112 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 GP6Q9HCN6 339 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 CCDC177Q9NQR7 707 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-204ENST00000479099 HPF1Q9NWY4 346 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 TMEM160Q9NX00 188 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 COG5Q9UP83 839 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 SNX8Q9Y5X2 465 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ATP23Q9Y6H3 246 aa6.51□□□□□ -1.37
RC3H1-204ENST00000479099 ATAD2BQ9ULI0 1458 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 SYNJ2BP-COX16A0A087WUM0 186 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 A0A088AWK7 358 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 TRIM38O00635 465 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 KDM1AO60341 852 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ZSCAN22P10073 491 aaPredicted RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ENPP1P22413 925 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 MSH2P43246 934 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ERVK-24P63145 666 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 FOXO4P98177 505 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 PRKCQQ04759 706 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 LRRC74AQ0VAA2 488 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 BNIP3Q12983 259 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ACVR2BQ13705 512 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 AUHQ13825 339 aaKnown RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 SF3B3Q15393 1217 aaKnown RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 DLGAP5Q15398 846 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 FSCN1Q16658 493 aaKnown RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 TSTQ16762 297 aaKnown RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 TIGD6Q17RP2 521 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ZNF792Q3KQV3 632 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 FAM47CQ5HY64 1035 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 KLHDC7AQ5VTJ3 777 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ZNF783Q6ZMS7 281 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 OTUD6AQ7L8S5 288 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 KCNK18Q7Z418 384 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 PRPF39Q86UA1 669 aaKnown RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 C2CD5Q86YS7 1000 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 SLC44A2Q8IWA5 706 aaPredicted RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 LRRC71Q8N4P6 559 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 MARCH10Q8NA82 808 aaPredicted RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 RNF214Q8ND24 703 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 CEP70Q8NHQ1 597 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 GSDMBQ8TAX9 411 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ZNF606Q8WXB4 792 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 RIN2Q8WYP3 895 aaPredicted RBP6.5□□□□□ -1.37
RC3H1-204ENST00000479099 ANKS1AQ92625 1134 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 TAF4BQ92750 862 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 MUL1Q969V5 352 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 C18orf8Q96DM3 657 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 CCDC74BQ96LY2 380 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 KCNC2Q96PR1 638 aa6.5□□□□□ -1.37
RC3H1-204ENST00000479099 SLC2A13Q96QE2 648 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms